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Query: NC_011205:4718239:4724613 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4724613, End: 4724861, Length: 249

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:4517850:452442445244244524672249Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-39161
NC_011294:4560902:456727645672764567524249Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-39161
NC_010102:4745949:474890647489064749154249Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-39159
NC_011274:4538722:454509645450964545344249Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein9e-39158
NC_013961:441719:468423468423468671249Erwinia amylovora, complete genomeUncharacterized protein y4kO2e-30130
NC_009436:522649:544357544357544605249Enterobacter sp. 638, complete genomeCopG family transcriptional regulator2e-30130
NC_013971:3296272:330262933026293302877249Erwinia amylovora ATCC 49946 chromosome, complete genomeplasmid-like protein2e-30130
NC_020063:528296:547722547722547970249Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator6e-30129
NC_004547:442927:466558466558466815258Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative plasmid-related protein6e-30129
NC_015567:547500:552024552024552239216Serratia sp. AS9 chromosome, complete genomeputative plasmid-like protein8e-1372.4
NC_015566:547387:551838551838552053216Serratia sp. AS12 chromosome, complete genomeputative plasmid-like protein8e-1372.4
NC_010678:642769:644928644928645191264Ralstonia pickettii 12J chromosome 2, complete sequencetranscriptional regulator, CopG family2e-1064.7
NC_019940:2098902:210856321085632108832270Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator4e-1063.5
NC_010694:436500:437031437031437303273Erwinia tasmaniensis, complete genomehypothetical protein5e-1063.2
NC_009439:2427120:244171524417152441987273Pseudomonas mendocina ymp, complete genomeCopG family transcriptional regulator2e-0961.2
NC_016860:4024000:403777140377714038055285Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein7e-0959.3
NC_009837:92000:923469234692630285Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequencehypothetical protein4e-0856.6
NC_009787:17344:256302563025908279Escherichia coli E24377A plasmid pETEC_35, complete sequenceCopG family protein5e-0856.6
NC_004851:157675:177513177513177797285Shigella flexneri 2a str. 301 plasmid pCP301, complete sequencehypothetical protein7e-0856.2