Pre_GI: BLASTP Hits

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Query: NC_011205:4564645:4582042 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4582042, End: 4583343, Length: 1302

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:4312295:4313847431384743151481302Enterobacter cloacae SCF1 chromosome, complete genomeanaerobic c4-dicarboxylate antiporter0670
NC_013850:4993307:5015868501586850171691302Klebsiella variicola At-22 chromosome, complete genomeanaerobic c4-dicarboxylate antiporter, Dcu family2e-125449
NC_009832:4269804:4275274427527442766141341Serratia proteamaculans 568, complete genomeanaerobic c4-dicarboxylate antiporter, Dcu family9e-51201
NC_013592:577831:5951415951415964421302Dickeya dadantii Ech586, complete genomeanaerobic c4-dicarboxylate antiporter, Dcu family4e-128458
NC_010718:2860096:2861579286157928628801302Natranaerobius thermophilus JW/NM-WN-LF, complete genomeanaerobic c4-dicarboxylate antiporter, Dcu family1e-81303
NC_009832:426993:4542634542634555641302Serratia proteamaculans 568, complete genomeanaerobic c4-dicarboxylate antiporter, Dcu family0639
NC_012912:4012112:4012112401211240134131302Dickeya zeae Ech1591, complete genomeanaerobic c4-dicarboxylate antiporter, Dcu family6e-129461
NC_013421:1954915:1965407196540719667471341Pectobacterium wasabiae WPP163, complete genomeanaerobic c4-dicarboxylate antiporter, Dcu family4e-55216
NC_012880:3982383:3982383398238339836841302Dickeya dadantii Ech703, complete genomeanaerobic c4-dicarboxylate antiporter, Dcu family2e-126452
NC_008554:4839116:4847039484703948483611323Syntrophobacter fumaroxidans MPOB, complete genomeanaerobic c4-dicarboxylate antiporter, Dcu family2e-61236
NC_016801:1255611:1278693127869312800001308Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeanaerobic C4-dicarboxylate transporter4e-105381
NC_016788:1214026:1233045123304512343521308Corynebacterium diphtheriae HC04 chromosome, complete genomeanaerobic C4-dicarboxylate transporter4e-105381
NC_002935:1237585:1259869125986912611761308Corynebacterium diphtheriae NCTC 13129, complete genomeanaerobic C4-dicarboxylate transporter2e-104379
NC_014215:421683:4334964334964348121317Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Anaerobic C4-dicarboxylate transporter1e-79297
NC_006905:3717306:3729657372965737309761320Salmonella enterica subsp. enterica serovar Choleraesuis stranaerobic C4-dicarboxylate transporter6e-68258
NC_012667:46432:4995149951512791329Vibrio cholerae MJ-1236 chromosome 2, complete genomeanaerobic C4-dicarboxylate transporter7e-61234
NC_002506:207097:2223122223122236401329Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeanaerobic C4-dicarboxylate transporter7e-61234
NC_016781:1039716:1056356105635610577411386Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeanaerobic C4-dicarboxylate transporter2e-57223
NC_017300:1045555:1053838105383810552231386Corynebacterium pseudotuberculosis 1002 chromosome, completeAnaerobic C4-dicarboxylate transporter2e-57223
NC_016783:1169821:1195608119560811969931386Corynebacterium diphtheriae INCA 402 chromosome, complete genomeanaerobic C4-dicarboxylate transporter1e-55218
NC_016857:4573173:4590111459011145914121302Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74anaerobic C4-dicarboxylate transporter0713
NC_003197:4551880:4569529456952945708301302Salmonella typhimurium LT2, complete genomeanaerobic C4-dicarboxylate transporter0713
NC_011294:4409137:4424823442482344260071185Salmonella enterica subsp. enterica serovar Enteritidis stranaerobic C4-dicarboxylate transporter0712
NC_016802:1212726:1232935123293512342421308Corynebacterium diphtheriae HC02 chromosome, complete genomeanaerobic C4-dicarboxylate transporter4e-105381
NC_016790:1177349:1200435120043512017421308Corynebacterium diphtheriae VA01 chromosome, complete genomeanaerobic C4-dicarboxylate transporter4e-105381
NC_016782:1227246:1233633123363312349401308Corynebacterium diphtheriae 241 chromosome, complete genomeanaerobic C4-dicarboxylate transporter4e-105381
NC_016785:1193471:1213807121380712149881182Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeanaerobic C4-dicarboxylate transporter1e-72274
NC_016446:979884:9950879950879964151329Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeanaerobic C4-dicarboxylate transporter7e-61234
NC_009456:998935:1002454100245410037821329Vibrio cholerae O395 chromosome 1, complete sequenceanaerobic C4-dicarboxylate transporter7e-61234
NC_017301:1037519:1056001105600110573861386Corynebacterium pseudotuberculosis C231 chromosome, completeAnaerobic C4-dicarboxylate transporter2e-57223
NC_016932:1041306:1047981104798110493661386Corynebacterium pseudotuberculosis 316 chromosome, complete genomeAnaerobic C4-dicarboxylate transporter2e-57223
NC_004917:366104:3700653700653716391575Helicobacter hepaticus ATCC 51449, complete genomeanaerobic C4-dicarboxylate transporter4e-32139
NC_016860:4649274:4666923466692346682241302Salmonella enterica subsp. enterica serovar Typhimurium stranaerobic C4-dicarboxylate transporter0713
NC_011147:4297513:4314955431495543162561302Salmonella enterica subsp. enterica serovar Paratyphi A stranaerobic C4-dicarboxylate transporter0713
NC_016810:4573172:4590110459011045912941185Salmonella enterica subsp. enterica serovar Typhimurium stranaerobic C4-dicarboxylate transporter0712
NC_004431:4955658:4974506497450649758071302Escherichia coli CFT073, complete genomeanaerobic C4-dicarboxylate transporter0679
NC_011283:5170683:5193808519380851951091302Klebsiella pneumoniae 342 chromosome, complete genomeanaerobic C4-dicarboxylate transporter2e-125449
NC_016783:1239293:1259502125950212608091308Corynebacterium diphtheriae INCA 402 chromosome, complete genomeanaerobic C4-dicarboxylate transporter3e-105382
NC_016799:1268706:1288915128891512902221308Corynebacterium diphtheriae 31A chromosome, complete genomeanaerobic C4-dicarboxylate transporter4e-105381
NC_016786:1218032:1233602123360212349091308Corynebacterium diphtheriae HC01 chromosome, complete genomeanaerobic C4-dicarboxylate transporter4e-105381
NC_010498:1094000:1104532110453211058301299Escherichia coli SMS-3-5, complete genomeanaerobic C4-dicarboxylate transporter6e-89328
NC_009615:2311352:2341524234152423428731350Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanaerobic C4-dicarboxylate transporter1e-74280
NC_016945:207089:2222922222922236201329Vibrio cholerae IEC224 chromosome II, complete sequenceanaerobic C4-dicarboxylate transporter7e-61234
NC_012580:207025:2222402222402235681329Vibrio cholerae M66-2 chromosome II, complete sequenceanaerobic C4-dicarboxylate transporter7e-61234
NC_017303:1039562:1056202105620210575871386Corynebacterium pseudotuberculosis I19 chromosome, complete genomeAnaerobic C4-dicarboxylate transporter2e-57223
NC_010498:1117938:1139530113953011408461317Escherichia coli SMS-3-5, complete genomeanaerobic C4-dicarboxylate transporter4e-46186
NC_016863:4513106:4529966452996645312671302Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1anaerobic C4-dicarboxylate transporter0713
NC_016831:4367000:4382872438287243841731302Salmonella enterica subsp. enterica serovar Gallinarum/pullorumanaerobic C4-dicarboxylate transporter0713
NC_011745:4862218:4884120488412048854211302Escherichia coli ED1a chromosome, complete genomeanaerobic C4-dicarboxylate transporter0679
NC_010554:2789722:2791305279130527926301326Proteus mirabilis HI4320, complete genomeanaerobic C4-dicarboxylate transporter7e-169593
NC_021066:3703725:3703725370372537050261302Raoultella ornithinolytica B6, complete genomeanaerobic C4-dicarboxylate transporter7e-125447
NC_010498:1117938:1133553113355311348871335Escherichia coli SMS-3-5, complete genomeanaerobic C4-dicarboxylate transporter3e-107389
NC_016800:1243000:1262031126203112633381308Corynebacterium diphtheriae BH8 chromosome, complete genomeanaerobic C4-dicarboxylate transporter4e-105381
NC_016787:1207488:1223058122305812243651308Corynebacterium diphtheriae HC03 chromosome, complete genomeanaerobic C4-dicarboxylate transporter4e-105381
NC_016789:1257392:1277600127760012789071308Corynebacterium diphtheriae PW8 chromosome, complete genomeanaerobic C4-dicarboxylate transporter7e-104377
NC_013716:357928:3842893842893855781290Citrobacter rodentium ICC168, complete genomeanaerobic C4-dicarboxylate transporter4e-79295
NC_012590:1446500:1462076146207614634611386Corynebacterium aurimucosum ATCC 700975, complete genomeAnaerobic C4-dicarboxylate transporter9e-61234
NC_017305:1037133:1053773105377310551581386Corynebacterium pseudotuberculosis PAT10 chromosome, completeAnaerobic C4-dicarboxylate transporter2e-57223
NC_017031:1039548:1056188105618810575731386Corynebacterium pseudotuberculosis P54B96 chromosome, completeAnaerobic C4-dicarboxylate transporter2e-57223
NC_010498:1117938:1140962114096211422781317Escherichia coli SMS-3-5, complete genomeanaerobic C4-dicarboxylate transporter4e-49196
NC_017046:4571833:4588771458877145900721302Salmonella enterica subsp. enterica serovar Typhimurium str. 798anaerobic C4-dicarboxylate transporter0713
NC_016856:4563435:4582360458236045836611302Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sanaerobic C4-dicarboxylate transporter0713
NC_006905:4486433:4504230450423045055311302Salmonella enterica subsp. enterica serovar Choleraesuis stranaerobic C4-dicarboxylate transporter0713
NC_011274:4385039:4402727440272744039111185Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91anaerobic C4-dicarboxylate transporter0712
NC_017154:331921:3534933534933547941302Yersinia pestis D106004 chromosome, complete genomeanaerobic C4-dicarboxylate transporter7e-175613
NC_004547:667988:6931116931116944121302Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeanaerobic C4-dicarboxylate transporter7e-128457
NC_013961:3269368:3271042327104232723431302Erwinia amylovora, complete genomeAnaerobic C4-dicarboxylate transporter dcuA1e-121436
NC_011080:4543000:4568938456893845702391302Salmonella enterica subsp. enterica serovar Newport str. SL254,anaerobic C4-dicarboxylate transporter DcuA0713
NC_020211:379000:4002934002934015941302Serratia marcescens WW4, complete genomeC4-dicarboxylate antiporter0637
NC_013353:5090696:5122804512280451241051302Escherichia coli O103:H2 str. 12009, complete genomeC4-dicarboxylate antiporter DcuA0679
AP010958:5090696:5122804512280451241051302Escherichia coli O103:H2 str. 12009 DNA, complete genomeC4-dicarboxylate antiporter DcuA0679
CP002797:4411763:4413487441348744148271341Escherichia coli NA114, complete genomeC4-dicarboxylate transporter protein DcuB5e-55215
NC_012583:242760:2571872571872585151329Vibrio cholerae O395 chromosome chromosome II, complete sequenceC4-dicarboxylate transporter, anaerobic7e-61234
NC_013956:455000:4691784691784704791302Pantoea ananatis LMG 20103 chromosome, complete genomeDcuA7e-115414
NC_016785:1193471:121368012136801213820141Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomehypothetical protein3e-1170.1
NC_015683:1146913:1150767115076711521521386Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein2e-58226
NC_017317:1143378:1147919114791911493041386Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein2e-58226
NC_014329:1041556:1056365105636510577501386Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein2e-57223
NC_010067:3247169:3248618324861832499581341Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-55217
NC_010545:1729161:1747434174743417487381305Corynebacterium urealyticum DSM 7109, complete genomeputative transporter5e-117421