Pre_GI: BLASTP Hits

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Query: NC_011205:4564645:4578424 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4578424, End: 4578558, Length: 135

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:4367000:437925443792544379388135Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-1889
NC_011294:4409137:442120544212054421339135Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein7e-1889
NC_011274:4385039:439910943991094399243135Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-1787.4
NC_006905:4486433:450061245006124500746135Salmonella enterica subsp. enterica serovar Choleraesuis strail and ompX Homolog2e-1787.4
NC_012125:4481808:449598744959874496121135Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane protein X2e-1684.3
NC_011149:4474012:448809744880974488231135Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein4e-1683.6
NC_017046:4571833:458362545836254583759135Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-1683.2
NC_016810:4573172:458496445849644585098135Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-1683.2
NC_011083:4547825:456187745618774562011135Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ail and OmpX Homolog4e-1683.2
NC_011080:4543000:456532045653204565454135Salmonella enterica subsp. enterica serovar Newport str. SL254,ail and OmpX Homolog8e-1579
NC_016832:4368948:438072443807244380858135Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-1478.6