Pre_GI: BLASTP Hits

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Query: NC_011205:4564645:4576600 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4576600, End: 4576893, Length: 294

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:4543000:455299445529944553287294Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein1e-42171
NC_016832:4368948:437890743789074379200294Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-42171
NC_004631:4381724:439168343916834391976294Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-42171
NC_003198:4397074:440703344070334407326294Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-42171
NC_016810:4573172:458314045831404583433294Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-42170
NC_011294:4409137:441938144193814419674294Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-42170
NC_011274:4385039:439728543972854397578294Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-42170
NC_011147:4297513:430952143095214309814294Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-42170
NC_003197:4551880:456256045625604562853294Salmonella typhimurium LT2, complete genomehypothetical protein3e-42170
NC_016831:4367000:437743043774304377723294Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-42170
NC_016856:4563435:457539045753904575683294Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-42170
NC_016857:4573173:458314145831414583434294Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein3e-42170
NC_016860:4649274:465995446599544660247294Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-42170
NC_016863:4513106:452299645229964523289294Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-42170
NC_017046:4571833:458180145818014582094294Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein3e-42170
NC_011094:4442478:445247044524704452763294Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-42170
NC_016845:4539381:456140045614004561693294Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative CopG family helix-turn-helix protein5e-40162
NC_012912:4012112:402458740245874024880294Dickeya zeae Ech1591, complete genomeProtein of unknown function DUF17788e-39158
NC_003198:4513900:453022145302214530514294Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-38157
NC_004631:4494000:451303045130304513323294Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-38157
NC_004547:1062410:106978110697811070074294Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-38157
NC_013716:3708415:372185737218573722150294Citrobacter rodentium ICC168, complete genomehypothetical protein6e-38155
NC_012880:3982383:400087640008764001169294Dickeya dadantii Ech703, complete genomeProtein of unknown function DUF17786e-38155
NC_014500:564864:581656581656581949294Dickeya dadantii 3937 chromosome, complete genomeputative helix-turn-helix protein, copG family2e-36150
NC_014500:564864:587253587253587546294Dickeya dadantii 3937 chromosome, complete genomeputative helix-turn-helix protein, copG family2e-36150
NC_017271:3641705:365594136559413656231291Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein3e-27120
NC_010688:1192410:124273212427321243022291Xanthomonas campestris pv. campestris, complete genomeputative DNA-binding protein2e-27120
NC_007086:1224867:126814712681471268437291Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-27120
NC_003902:3666544:367842936784293678719291Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein2e-27120
NC_014228:4408500:442126144212614421539279Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-2096.7
NC_012721:1686450:169357516935751693856282Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-1994.7
NC_015186:347346:354738354738355040303Acidiphilium multivorum AIU301, complete genomehypothetical protein1e-1581.6
NC_009484:318500:322246322246322575330Acidiphilium cryptum JF-5 chromosome, complete genomehypothetical protein2e-1581.3
NC_010998:111052:130559130559130816258Rhizobium etli CIAT 652 plasmid pA, complete sequencehypothetical protein1e-1478.2
NC_012880:3529017:354971135497113549935225Dickeya dadantii Ech703, complete genomehypothetical protein9e-1475.5
NC_015942:2060349:206248120624812062753273Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein8e-1165.9
NC_009720:900884:913634913634913933300Xanthobacter autotrophicus Py2, complete genomehypothetical protein2e-0857.8
NC_009668:445134:464488464488464787300Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein3e-0857.4
NC_014500:443874:464035464035464307273Dickeya dadantii 3937 chromosome, complete genomeputative cytoplasmic protein3e-0754.3
NC_020181:1344259:136039813603981360664267Enterobacter aerogenes EA1509E, complete genomeFIG032766: hypothetical protein2e-0754.3
NC_010725:1419272:146705814670581467396339Methylobacterium populi BJ001, complete genomeProtein of unknown function DUF17782e-0754.3
NC_021066:1393750:140395214039521404230279Raoultella ornithinolytica B6, complete genomehypothetical protein2e-0754.3
NC_014107:171170:198644198644198910267Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,hypothetical protein4e-0753.5
NC_014306:3102000:312397531239753124241267Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein8e-0752.4
NC_014365:2888897:289193228919322892216285Desulfarculus baarsii DSM 2075 chromosome, complete genomeProtein of unknown function DUF17782e-0651.2
NC_015761:1488807:150493215049321505210279Salmonella bongori NCTC 12419, complete genomehypothetical protein3e-0650.8
NC_015186:491930:496572496572496886315Acidiphilium multivorum AIU301, complete genomehypothetical protein3e-0650.4
NC_006905:3780000:379030337903033790590288Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein3e-0650.4
NC_007608:97092:120130120130120432303Shigella boydii Sb227 plasmid pSB4_227, complete sequencehypothetical protein9e-0648.9
NC_010660:175200:204009204009204311303Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencehypothetical protein9e-0648.9