Pre_GI: BLASTP Hits

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Query: NC_011205:4564645:4576061 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4576061, End: 4576204, Length: 144

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:4513106:452245845224584522679222Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein7e-1889.4
NC_016857:4573173:458260345826034582824222Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein7e-1889.4
NC_016856:4563435:457485245748524575073222Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein7e-1889.4
NC_016810:4573172:458260245826024582823222Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein7e-1889.4
NC_011294:4409137:441884344188434419064222Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein7e-1889.4
NC_011274:4385039:439674743967474396968222Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein7e-1889.4
NC_003197:4551880:456202245620224562243222Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein7e-1889.4
NC_010102:4477836:448754444875444487687144Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-1889
NC_011083:4547825:455724645572464557389144Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein9e-1889
NC_016831:4367000:437689243768924377035144Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein9e-1889
NC_006905:4486433:449598144959814496202222Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein8e-1889
NC_012125:4481808:449135644913564491577222Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein8e-1889
NC_011147:4297513:430898243089824309200219Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-1683.6
NC_004631:4381724:439114443911444391362219Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-1683.6
NC_003198:4397074:440649444064944406712219Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-1683.6