Pre_GI: BLASTP Hits

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Query: NC_011205:4564645:4572969 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4572969, End: 4573829, Length: 861

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4368948:437520543752054376065861Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,SdiA-regulated2e-157555
NC_011149:4474012:448034944803494481209861Salmonella enterica subsp. enterica serovar Agona str. SL483,sdiA-regulated family protein2e-157555
NC_010102:4477836:448417344841734485033861Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-157555
NC_006905:4486433:449272544927254493630906Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein3e-157554
NC_004631:4381724:438793643879364388841906Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-157554
NC_003198:4397074:440328644032864404191906Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-157554
NC_012125:4481808:448810044881004489005906Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-157554
NC_016860:4649274:465561146556114656471861Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-157553
NC_011147:4297513:430577343057734306678906Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-157552
NC_003197:4551880:455817245581724559077906Salmonella typhimurium LT2, complete genomeputative inner membrane protein8e-157552
NC_011080:4543000:454929145492914550196906Salmonella enterica subsp. enterica serovar Newport str. SL254,putative inner membrane protein8e-157552
NC_011294:4409137:441542844154284416333906Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein8e-157552
NC_016810:4573172:457946445794644580369906Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein8e-157552
NC_016856:4563435:457171445717144572619906Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein8e-157552
NC_016857:4573173:457946545794654580370906Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein8e-157552
NC_016863:4513106:451932045193204520225906Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein8e-157552
NC_017046:4571833:457812545781254579030906Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein8e-157552
NC_011083:4547825:455408045540804554985906Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein2e-156551
NC_011274:4385039:439333643933364394241906Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-156549
NC_011094:4442478:444877044487704449675906Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein7e-156549
NC_016831:4367000:437352743735274374387861Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-155548
NC_015740:926920:945554945554946489936Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein1e-35150
NC_009434:1068281:108676910867691087704936Pseudomonas stutzeri A1501, complete genomehypothetical protein1e-35150
NC_009512:5632591:568562956856295686531903Pseudomonas putida F1, complete genomeSdiA-regulated domain protein2e-35149
NC_013716:3109700:314562131456213146439819Citrobacter rodentium ICC168, complete genomeLEE-associated conserved hypothetical protein4e-32138
NC_007005:6056765:606171060617106062690981Pseudomonas syringae pv. syringae B728a, complete genomeSdiA-regulated4e-31135
NC_016832:4649432:466389346638934664738846Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-30134
NC_004631:4687270:468727046872704688115846Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative outer membrane protein1e-30134
NC_003198:4676536:470434647043464705191846Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative outer membrane protein1e-30134
NC_002655:4653160:469172746917274692545819Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-29130
NC_002695:4584177:462274446227444623562819Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-29130
NC_011353:4688000:472584847258484726666819Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesdiA-regulated domain-containing protein1e-29130
NC_013008:4643825:468188946818894682707819Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor1e-29130
NC_013941:4470932:451023745102374511055819Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-29130
NC_011601:4096427:413651741365174137335819Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein8e-30130
NC_016831:4517850:453471545347154535560846Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative outer membrane protein3e-29129
NC_006511:4465495:448002044800204480859840Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative outer membrane protein2e-29129
NC_011147:4460726:447525044752504476089840Salmonella enterica subsp. enterica serovar Paratyphi A strouter membrane protein2e-29129
NC_011294:4560902:457756845775684578413846Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane protein4e-29128
NC_011274:4538722:455538645553864556231846Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein9e-29127
NC_013364:3701895:371635637163563717174819Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-28126
NC_013361:5319497:533049353304935331311819Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein5e-28125
AP010958:3669500:371257137125713713389819Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS component9e-28124
NC_013353:3669500:371257137125713713389819Escherichia coli O103:H2 str. 12009, complete genomeT3SS component9e-28124
NC_011080:4543000:456353245635324564380849Salmonella enterica subsp. enterica serovar Newport str. SL254,SrgB4e-27122
NC_011205:4718239:473513147351314735751621Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-20100
NC_007513:1159497:117620111762011177043843Synechococcus sp. CC9902, complete genomeconserved hypothetical inner membrane protein7e-1064.7
NC_010628:1734000:1739570173957017460406471Nostoc punctiforme PCC 73102, complete genomeputative outer membrane adhesin like proteiin5e-0652