Pre_GI: BLASTP Hits

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Query: NC_011205:329155:350596 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 350596, End: 351417, Length: 822

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:311796:326511326511327332822Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-162570
NC_011149:309556:328273328273329094822Salmonella enterica subsp. enterica serovar Agona str. SL483,polysaccharide deacetylase family protein2e-161568
NC_010102:2762304:276950727695072770328822Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-160565
NC_003197:332086:346974346974347795822Salmonella typhimurium LT2, complete genomeputative xylanase/chitin deacetylase4e-160563
NC_016810:329849:346452346452347273822Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-160563
NC_016856:332771:347659347659348480822Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative xylanase/chitin deacetylase4e-160563
NC_016860:332087:346975346975347796822Salmonella enterica subsp. enterica serovar Typhimurium strputative xylanase/chitin deacetylase4e-160563
NC_016863:332060:346948346948347769822Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative xylanase/chitin deacetylase4e-160563
NC_016857:329849:346380346380347273894Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative xylanase/chitin deacetylase3e-160563
NC_017046:329847:346378346378347271894Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein3e-160563
NC_011094:334267:347917347917348738822Salmonella enterica subsp. enterica serovar Schwarzengrund strpolysaccharide deacetylase2e-159561
NC_003198:331314:347043347043347864822Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-159561
NC_004631:2615908:263324926332492634070822Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-159561
NC_016832:2612809:263014926301492630970822Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Polysaccharide deacetylase2e-159561
NC_011080:333121:351483351483352304822Salmonella enterica subsp. enterica serovar Newport str. SL254,polysaccharide deacetylase family protein1e-159561
NC_011147:2536000:255351225535122554333822Salmonella enterica subsp. enterica serovar Paratyphi A strybeJ-like protein4e-159560
NC_006511:2540500:255797625579762558797822Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCybeJ-like protein4e-159560
NC_012125:326909:341415341415342308894Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-158557
NC_006905:326517:341618341618342439822Salmonella enterica subsp. enterica serovar Choleraesuis strputative xylanase/chitin deacetylase4e-158556
NC_016831:2667561:267660126766012677422822Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-158556
NC_009790:42112:595285952860349822Escherichia coli E24377A plasmid pETEC_74, complete sequencepolysaccharide deacetylase family protein1e-99363
NC_011750:4947500:496632349663234967144822Escherichia coli IAI39 chromosome, complete genomeputative polysaccharide deacetylase1e-99363
NC_004851:191709:191709191709192551843Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceputative carbohydrate transport protein8e-99360
NC_014166:2217790:224111322411132241874762Arcobacter nitrofigilis DSM 7299 chromosome, complete genomepolysaccharide deacetylase8e-38157
NC_016002:2946702:2948536294853629503831848Pseudogulbenkiania sp. NH8B, complete genomepolysaccharide deacetylase6e-2098.2
NC_010382:3783879:380710838071083807848741Lysinibacillus sphaericus C3-41, complete genomehypothetical protein2e-1996.3
NC_017068:1143515:117595811759581176788831Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative polysaccharide deacetylase4e-1995.5
NC_019897:3810000:3820114382011438213131200Thermobacillus composti KWC4 chromosome, complete genomexylanase/chitin deacetylase1e-1893.6
NC_009715:399159:409753409753410553801Campylobacter curvus 525.92 chromosome, complete genomeyggt family protein1e-1790.9
NC_003454:1889529:1898617189861718996991083Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completePolysaccharide deacetylase1e-1790.5
NC_003454:1889529:190057919005791901331753Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completePolysaccharide deacetylase5e-1788.2
NC_015873:238187:240916240916241722807Megasphaera elsdenii DSM 20460, complete genomepolysaccharide deacetylase1e-1584
NC_014098:2109416:2126409212640921274101002Bacillus tusciae DSM 2912 chromosome, complete genomepolysaccharide deacetylase1e-1583.6
NC_015216:808000:8235718235718247821212Methanobacterium sp. AL-21 chromosome, complete genomepolysaccharide deacetylase7e-1581.3
NC_016745:675909:6900946900946918631770Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein9e-1580.9
NC_013526:439813:472830472830473771942Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomepolysaccharide deacetylase2e-1479.7
NC_011206:1792621:180921218092121810048837Acidithiobacillus ferrooxidans ATCC 53993, complete genomepolysaccharide deacetylase2e-1479.7
NC_007946:149733:1511121511121523411230Escherichia coli UTI89, complete genomeconserved hypothetical protein YadE3e-1479.3
NC_008563:149709:1510881510881523171230Escherichia coli APEC O1, complete genomehypothetical protein3e-1479.3
NC_011601:149428:1508071508071520361230Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomepolysaccharide deacetylase3e-1479.3
NC_011742:149732:1511111511111523401230Escherichia coli S88 chromosome, complete genomeexported polysaccharide deacetylase3e-1479.3
NC_009925:2728203:2747589274758927488001212Acaryochloris marina MBIC11017, complete genomepolysaccharide deacetylase2e-1479.3
NC_011761:1904637:192363219236321924402771Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completepolysaccharide deacetylase family protein3e-1479
NC_010498:153755:1551341551341563631230Escherichia coli SMS-3-5, complete genomepolysaccharide deacetylase domain-containing protein3e-1479
NC_011745:149594:1509731509731522021230Escherichia coli ED1a chromosome, complete genomeputative exported polysaccharide deacetylase4e-1478.6
NC_008253:149693:1501971501971514261230Escherichia coli 536, complete genomeYadE protein, polysaccharide deacetylase4e-1478.6
NC_004431:153907:1552861552861565151230Escherichia coli CFT073, complete genomeHypothetical protein yadE precursor4e-1478.6
NC_007929:1805000:182021718202171821017801Lactobacillus salivarius subsp. salivarius UCC118, complete genomePolysaccharide deacetylase8e-1477.8
NC_009801:143426:1464991464991477281230Escherichia coli E24377A, complete genomepolysaccharide deacetylase domain protein1e-1377
NC_013520:571647:585345585345586205861Veillonella parvula DSM 2008, complete genomepolysaccharide deacetylase2e-1376.6
NC_011748:143755:1451341451341463631230Escherichia coli 55989, complete genomeputative exported polysaccharide deacetylase2e-1376.6
AP010958:143358:1464311464311476601230Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted polysaccharide deacetylase lipoprotein2e-1376.6
CU928145:143755:1451341451341463631230Escherichia coli 55989 chromosome, complete genomeputative exported polysaccharide deacetylase2e-1376.6
NC_011415:146397:1463971463971476261230Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-1376.6
NC_013353:143358:1464311464311476601230Escherichia coli O103:H2 str. 12009, complete genomepolysaccharide deacetylase lipoprotein2e-1376.6
NC_013361:145461:1477631477631489921230Escherichia coli O26:H11 str. 11368 chromosome, complete genomepolysaccharide deacetylase2e-1376.6
NC_013364:143492:1465651465651477941230Escherichia coli O111:H- str. 11128, complete genomeputative polysaccharide deacetylase lipoprotein2e-1376.6
NC_011741:145276:1452761452761465051230Escherichia coli IAI1 chromosome, complete genomeputative exported polysaccharide deacetylase1e-1376.6
CU928160:145276:1452761452761465051230Escherichia coli IAI1 chromosome, complete genomeputative exported polysaccharide deacetylase1e-1376.6
NC_016902:3949061:3964285396428539655141230Escherichia coli KO11FL chromosome, complete genomepolysaccharide deacetylase2e-1376.6
CP002185:146389:1463891463891476181230Escherichia coli W, complete genomepredicted polysaccharide deacetylase lipoprotein2e-1376.6
CP002516:3949061:3964285396428539655141230Escherichia coli KO11, complete genomepolysaccharide deacetylase2e-1376.6
NC_011740:165363:1667351667351679611227Escherichia fergusonii ATCC 35469, complete genomeputative exported polysaccharide deacetylase2e-1376.3
NC_018645:2690325:270951427095142710311798Desulfobacula toluolica Tol2, complete genomepolysaccharide deacetylase3e-1375.9
NC_010468:3835259:3853273385327338545021230Escherichia coli ATCC 8739, complete genomepolysaccharide deacetylase2e-1273.2
AC_000091:144577:1450811450811463101230Escherichia coli W3110 DNA, complete genomepredicted polysaccharide deacetylase lipoprotein2e-1273.2
NC_010473:118681:1191851191851204141230Escherichia coli str. K-12 substr. DH10B, complete genomepredicted polysaccharide deacetylase lipoprotein2e-1273.2
NC_000913:144577:1450811450811463101230Escherichia coli K12, complete genomepredicted polysaccharide deacetylase lipoprotein2e-1273.2
NC_012759:144576:1450801450801463091230Escherichia coli BW2952 chromosome, complete genomeputative polysaccharide deacetylase lipoprotein2e-1273.2
NC_012947:3619384:3634608363460836358371230Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completepolysaccharide deacetylase2e-1273.2
NC_012967:145582:1478841478841491131230Escherichia coli B str. REL606 chromosome, complete genomeputative polysaccharide deacetylase lipoprotein2e-1273.2
NC_002695:1329472:1330790133079013328082019Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-1271.6
NC_002655:1413244:1414562141456214165802019Escherichia coli O157:H7 EDL933, complete genomehypothetical protein6e-1271.6
NC_011353:1271335:1273068127306812750862019Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeouter membrane N-deacetylase6e-1271.6
NC_013008:1271621:1273354127335412753722019Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane N-deacetylase6e-1271.6
AC_000091:1083798:1088261108826110902792019Escherichia coli W3110 DNA, complete genomepredicted enzyme associated with biofilm formation6e-1271.6
NC_010468:2809125:2819874281987428218922019Escherichia coli ATCC 8739, complete genomepolysaccharide deacetylase6e-1271.6
NC_000913:1087062:1087062108706210890802019Escherichia coli K12, complete genomepredicted enzyme associated with biofilm formation6e-1271.6
NC_007946:1073135:1074453107445310764712019Escherichia coli UTI89, complete genomehypothetical lipoprotein YcdR precursor5e-1271.6
NC_004431:1119700:1121018112101811230362019Escherichia coli CFT073, complete genomeHypothetical lipoprotein ycdR precursor5e-1271.6
NC_005125:2269343:2277625227762522791811557Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-1170.1
NC_009654:4253431:4268302426830242693661065Marinomonas sp. MWYL1, complete genomepolysaccharide deacetylase3e-1169.3
NC_010718:2513917:2543346254334625443561011Natranaerobius thermophilus JW/NM-WN-LF, complete genomepolysaccharide deacetylase4e-1168.6
NC_016077:113246:117417117417118250834Acidaminococcus intestini RyC-MR95 chromosome, complete genomepolysaccharide deacetylase7e-1168.2
NC_008258:1076922:1079768107976810825142747Shigella flexneri 5 str. 8401, complete genome5e-1168.2
NC_017187:1683619:168633616863361687046711Arcobacter butzleri ED-1, complete genomehypothetical protein1e-1067.4
NC_015731:1299955:131329013132901314057768Nitrosomonas sp. Is79A3 chromosome, complete genomepolysaccharide deacetylase1e-1067.4
NC_016012:977357:993112993112993900789Candidatus Arthromitus sp. SFB-rat-Yit, complete genomepolysaccharide deacetylase family protein2e-1067
NC_015318:981989:1001459100145910024721014Hippea maritima DSM 10411 chromosome, complete genomepolysaccharide deacetylase2e-1066.6
NC_017387:1110412:1131303113130311332971995Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeputative lipoprotein (hemin storage system) (HmsF)3e-1065.9
NC_008740:1815743:1840637184063718416501014Marinobacter aquaeolei VT8, complete genomepolysaccharide deacetylase5e-1065.1
NC_015913:1082323:109656510965651097398834Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomepolysaccharide deacetylase family protein6e-1064.7
NC_017294:1060684:107491610749161075749834Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomepolysaccharide deacetylase family protein6e-1064.7
NC_014962:826563:832588832588833376789Isosphaera pallida ATCC 43644 chromosome, complete genomepolysaccharide deacetylase8e-1064.3
NC_016943:336550:344606344606345463858Blastococcus saxobsidens DD2, complete genomeputative polysaccharide deacetylase9e-1064.3
NC_011000:1216430:124804612480461248807762Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative polysaccharide deacetylase2e-0963.2
NC_015635:5154730:520401652040165204714699Microlunatus phosphovorus NM-1, complete genomeputative hydrolase3e-0962.8
NC_013223:343344:359338359338360306969Desulfohalobium retbaense DSM 5692, complete genomepolysaccharide deacetylase4e-0962
NC_017270:220282:2262052262052279771773Vibrio cholerae LMA3984-4 chromosome chromosome I, completepolysaccharide deacetylase1e-0860.5
NC_002505:238569:2432122432122449841773Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-0860.5
NC_009457:2764972:2769615276961527713871773Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-0860.5
NC_012582:272320:2769632769632787351773Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein1e-0860.5
NC_012668:368305:3940023940023957741773Vibrio cholerae MJ-1236 chromosome 1, complete sequencepolysaccharide deacetylase1e-0860.5
NC_016445:2663837:2668480266848026702521773Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-0860.5
NC_016944:238580:2432232432232449951773Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-0860.5
NC_010515:1428664:143046314304631431224762Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencepolysaccharide deacetylase2e-0860.1
NC_019904:3533344:354575335457533546652900Echinicola vietnamensis DSM 17526 chromosome, complete genomexylanase/chitin deacetylase2e-0860.1
NC_011958:735755:775493775493776239747Rhodobacter sphaeroides KD131 chromosome 2, complete genomepolysaccharide deacetylase2e-0859.7
NC_014734:849941:857616857616858479864Paludibacter propionicigenes WB4 chromosome, complete genomepolysaccharide deacetylase4e-0858.9
NC_011725:334000:3522943522943533761083Bacillus cereus B4264 chromosome, complete genomepolysaccharide deacetylase9e-0857.8
NC_014012:207289:2072892072892083501062Shewanella violacea DSS12, complete genomepolysaccharide deacetylase family protein9e-0857.8
NC_011772:323050:3385043385043395861083Bacillus cereus G9842, complete genomepolysaccharide deacetylase-like protein1e-0757.4
NC_011884:1541256:1568244156824415703132070Cyanothece sp. PCC 7425, complete genomeglycosyl transferase family 24e-0755.5