Pre_GI: BLASTP Hits

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Query: NC_011205:3078732:3097393 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 3097393, End: 3097773, Length: 381

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2938519:298691029869102987290381Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein2e-68256
NC_016810:3028421:307547830754783075858381Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-68256
NC_011294:2919906:293766129376612938041381Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-67254
NC_011274:2909799:292846529284652928845381Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-66251
NC_004631:2872192:288922428892242889520297Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-50197
NC_010102:2967464:301762030176203018000381Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-69260
NC_017046:3027161:307421830742183074598381Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-68256
NC_016831:2867766:291492529149252915305381Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-67254
NC_003198:2856596:290336729033672903663297Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-50197
NC_011094:2913500:295823929582392958619381Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-68256
NC_016832:2859491:287652328765232876819297Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-50197
NC_020064:2960332:297789929778992978291393Serratia marcescens FGI94, complete genomehypothetical protein1e-27121
NC_011147:2814664:286144628614462861826381Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-67252
NC_006511:2819128:286591028659102866224315Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-53206
NC_016863:2974333:302139230213923021772381Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein4e-68256
NC_016856:3026426:307313930731393073519381Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein4e-68256
NC_011080:2982346:303115030311503031530381Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein1e-66251
NC_016857:3028421:307547830754783075858381Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein4e-68256
NC_003197:3005842:305290230529023053282381Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein4e-68256
NC_011149:2912219:296305829630582963438381Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein7e-67251
NC_006905:2987863:300652830065283006908381Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein2e-68256
NC_016860:3029272:307633230763323076712381Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein4e-68256
NC_011083:3009760:302750730275073027887381Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein4e-68256
NC_014306:4901390:490444649044464904826381Erwinia billingiae Eb661, complete genomePutative cytoplasmic protein5e-31132