Pre_GI: BLASTP Hits

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Query: NC_011205:3078732:3087679 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 3087679, End: 3088428, Length: 750

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:3027161:306459830645983065347750Salmonella enterica subsp. enterica serovar Typhimurium str. 798AraC-family regulatory protein4e-146516
NC_006905:2987863:299681029968102997571762Salmonella enterica subsp. enterica serovar Choleraesuis strinvasion protein4e-146516
NC_010102:2967464:300626430062643007013750Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-146516
NC_011080:2982346:301978630197863020535750Salmonella enterica subsp. enterica serovar Newport str. SL254,invasion protein4e-146516
NC_011083:3009760:301779630177963018545750Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,invasion protein4e-146516
NC_011147:2814664:285335428533542854103750Salmonella enterica subsp. enterica serovar Paratyphi A strAraC-family regulatory protein4e-146516
NC_012125:2938519:297719329771932977942750Salmonella enterica subsp. enterica serovar Paratyphi C straininvasion protein4e-146516
NC_016831:2867766:290520629052062905955750Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative AraC-family regulatory protein4e-146516
NC_016832:2859491:286843828684382869187750Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-146516
NC_016856:3026426:306351930635193064268750Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sinvasion regulatory protein4e-146516
NC_016857:3028421:306585830658583066607750Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74invasion regulatory protein4e-146516
NC_016860:3029272:306671230667123067461750Salmonella enterica subsp. enterica serovar Typhimurium strinvasion protein4e-146516
NC_011149:2912219:295180829518082952557750Salmonella enterica subsp. enterica serovar Agona str. SL483,invasion protein3e-145514
NC_011094:2913500:295047829504782951227750Salmonella enterica subsp. enterica serovar Schwarzengrund strinvasion protein3e-145514
NC_010067:51000:709577095771706750Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-136485
NC_006511:2819128:285781828578182858468651Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible AraC-family regulatory protein1e-125448
NC_004631:2872192:288113928811392881789651Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible AraC-family regulatory protein1e-125448
NC_003198:2856596:289528228952822895932651Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible AraC-family regulatory protein1e-125448
NC_003197:3005842:304328230432823043932651Salmonella typhimurium LT2, complete genomeinvasion regulatory protein1e-125448
NC_011274:2909799:291874629187462919396651Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91AraC family regulatory protein1e-125448
NC_011294:2919906:292794229279422928592651Salmonella enterica subsp. enterica serovar Enteritidis strAraC family regulatory protein1e-125448
NC_016810:3028421:306585830658583066508651Salmonella enterica subsp. enterica serovar Typhimurium strAraC family regulatory protein1e-125448
NC_016863:2974333:301177230117723012422651Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1invasion regulatory protein1e-125448
NC_002695:3702344:373413437341343734883750Escherichia coli O157:H7 str. Sakai, complete genomeEivF9e-41167
NC_002655:3769643:380143938014393802188750Escherichia coli O157:H7 EDL933, complete genomeputative regulatory protein for type III secretion apparatus9e-41167
NC_011751:3285646:331836233183623319111750Escherichia coli UMN026 chromosome, complete genomeInvasion protein invF9e-41166
NC_011353:3805819:383853138385313839280750Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein EivF9e-41166
NC_013008:3761467:379325737932573794006750Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulatory protein for type III secretion apparatus9e-41166
NC_013941:3540420:355813435581343558883750Escherichia coli O55:H7 str. CB9615 chromosome, complete genometype III secretion apparatus regulatory protein9e-41166
NC_020418:14965:377313773138363633Morganella morganii subsp. morganii KT, complete genomeType III secretion thermoregulatory protein3e-25115
NC_010694:2138000:216503321650332165893861Erwinia tasmaniensis, complete genomeType III secretion system transcriptional regulator1e-1996.7
NC_013722:1689125:171373017137301714362633Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus. transcription regulator protein3e-1892
NC_013961:1622616:163785616378561638722867Erwinia amylovora, complete genomeType III secretion system transcriptional regulator InvF4e-1788.6
NC_013971:1660144:167538416753841676250867Erwinia amylovora ATCC 49946 chromosome, complete genomeregulator of type III secretion system4e-1788.6
NC_012214:2221702:225239822523982253264867Erwinia pyrifoliae Ep1/96, complete genomeType III secretion system transcriptional regulator1e-1686.7
NC_013961:851044:862684862684863562879Erwinia amylovora, complete genomeType III secretion system transcriptional regulator invF3e-1685.5
NC_013971:2876733:290773829077382908616879Erwinia amylovora ATCC 49946 chromosome, complete genomeAraC family transcriptional regulator4e-1685.5