Pre_GI: BLASTP Hits

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Query: NC_011205:3078732:3084879 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 3084879, End: 3085997, Length: 1119

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:3027161:3061798306179830629161119Salmonella enterica subsp. enterica serovar Typhimurium str. 798cell invasion protein0642
NC_011083:3009760:3014996301499630161141119Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,invasion protein InvE0642
NC_003197:3005842:3040482304048230416001119Salmonella typhimurium LT2, complete genomeinvasion protein0642
NC_006905:2987863:2994010299401029951281119Salmonella enterica subsp. enterica serovar Choleraesuis strinvasion protein0642
NC_011149:2912219:2949008294900829501261119Salmonella enterica subsp. enterica serovar Agona str. SL483,invasion protein InvE0642
NC_011080:2982346:3016986301698630181041119Salmonella enterica subsp. enterica serovar Newport str. SL254,invasion protein InvE0642
NC_010102:2967464:3003464300346430045821119Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0642
NC_011094:2913500:2947678294767829487961119Salmonella enterica subsp. enterica serovar Schwarzengrund strinvasion protein InvE0642
NC_011274:2909799:2915946291594629170641119Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cell invasion protein0642
NC_011294:2919906:2925142292514229262601119Salmonella enterica subsp. enterica serovar Enteritidis strcell invasion protein0642
NC_016863:2974333:3008972300897230100901119Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1invasion protein0642
NC_016860:3029272:3063912306391230650301119Salmonella enterica subsp. enterica serovar Typhimurium strinvasion protein InvE0642
NC_016857:3028421:3063058306305830641761119Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74invasion protein0642
NC_016856:3026426:3060719306071930618371119Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sinvasion protein0642
NC_016831:2867766:2902406290240629035241119Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcell invasion protein0642
NC_016810:3028421:3063058306305830641761119Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein0642
NC_012125:2938519:2974393297439329755111119Salmonella enterica subsp. enterica serovar Paratyphi C straincell invasion protein0641
NC_006511:2819128:2855018285501828561361119Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCcell invasion protein0639
NC_004631:2872192:2878339287833928794571119Salmonella enterica subsp. enterica serovar Typhi Ty2, completecell invasion protein0639
NC_003198:2856596:2892482289248228936001119Salmonella enterica subsp. enterica serovar Typhi str. CT18,cell invasion protein0639
NC_011147:2814664:2850554285055428516721119Salmonella enterica subsp. enterica serovar Paratyphi A strcell invasion protein0639
NC_016832:2859491:2865638286563828667561119Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0639
NC_010067:51000:7339173391745091119Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0636
NC_011751:3285646:3315512331551233166811170Escherichia coli UMN026 chromosome, complete genomehypothetical protein8e-51201
NC_013008:3761467:3790407379040737915521146Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-50201
NC_011353:3805819:3835681383568138368261146Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein EivE1e-50201
NC_002695:3702344:3731284373128437324291146Escherichia coli O157:H7 str. Sakai, complete genomeEivE1e-50201
NC_002655:3769643:3798589379858937997341146Escherichia coli O157:H7 EDL933, complete genomeputative secreted protein1e-50201
NC_013941:3540420:3555305355530535564291125Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-50199
NC_013722:1689125:1716226171622617173411116Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus protein2e-23110
NC_012214:2221702:2249511224951122506261116Erwinia pyrifoliae Ep1/96, complete genomeType III secretion apparatus2e-1377.4
NC_020418:14965:3506835068361201053Morganella morganii subsp. morganii KT, complete genomehypothetical protein7e-1375.1
NC_013971:2876733:2904870290487029059821113Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein3e-1273.2
NC_013961:851044:8653188653188664301113Erwinia amylovora, complete genomeProtein mxiC3e-1273.2
NC_010694:2138000:2162133216213321632571125Erwinia tasmaniensis, complete genomeType III secretion apparatus9e-1065.1
NC_013971:1660144:1678020167802016791321113Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein6e-0962
NC_013961:1622616:1640492164049216416041113Erwinia amylovora, complete genomeInvasion protein InvE6e-0962