Pre_GI: BLASTP Hits

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Query: NC_011205:3078732:3082366 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 3082366, End: 3082773, Length: 408

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2974333:300645930064593006866408Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secretion chaperone2e-65247
NC_003198:2856596:288996928899692890376408Salmonella enterica subsp. enterica serovar Typhi str. CT18,secretory protein (associated with virulence)2e-65247
NC_003197:3005842:303796930379693038376408Salmonella typhimurium LT2, complete genomesecretion chaperone2e-65247
NC_011080:2982346:301447330144733014880408Salmonella enterica subsp. enterica serovar Newport str. SL254,surface presentation of antigens protein SpaK2e-65247
NC_004631:2872192:287582628758262876233408Salmonella enterica subsp. enterica serovar Typhi Ty2, completevirulence-associated secretory protein2e-65247
NC_011149:2912219:294649529464952946902408Salmonella enterica subsp. enterica serovar Agona str. SL483,surface presentation of antigens protein SpaK2e-65247
NC_011083:3009760:301248330124833012890408Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,surface presentation of antigens protein SpaK2e-65247
NC_011094:2913500:294516529451652945572408Salmonella enterica subsp. enterica serovar Schwarzengrund strsurface presentation of antigens protein SpaK2e-65247
NC_011294:2919906:292262929226292923036408Salmonella enterica subsp. enterica serovar Enteritidis strsecretory protein2e-65247
NC_016810:3028421:306054530605453060952408Salmonella enterica subsp. enterica serovar Typhimurium strchaperone protein for type III secretion system effectors2e-65247
NC_016831:2867766:289989328998932900300408Salmonella enterica subsp. enterica serovar Gallinarum/pullorumsecretory protein (associated with virulence)2e-65247
NC_016832:2859491:286312528631252863532408Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Surface presentation of antigens protein spaK2e-65247
NC_016856:3026426:305820630582063058613408Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecretion chaperone2e-65247
NC_016857:3028421:306054530605453060952408Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Surface presentation of antigens protein spaK2e-65247
NC_016860:3029272:306139930613993061806408Salmonella enterica subsp. enterica serovar Typhimurium strsurface presentation of antigens protein SpaK2e-65247
NC_006905:2987863:299149729914972991904408Salmonella enterica subsp. enterica serovar Choleraesuis strsurface presentation of antigens; secretory proteins4e-65246
NC_012125:2938519:297188029718802972287408Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence-associated secretory protein4e-65246
NC_011147:2814664:284804128480412848448408Salmonella enterica subsp. enterica serovar Paratyphi A strvirulence-associated secretory protein1e-64244
NC_006511:2819128:285250528525052852912408Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCvirulence-associated secretory protein1e-64244
NC_011274:2909799:291343329134332913840408Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91virulence associated secretory protein1e-64244
NC_010102:2967464:300095130009513001187237Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-31132
NC_017046:3027161:305928530592853059506222Salmonella enterica subsp. enterica serovar Typhimurium str. 798chaperone protein for type III secretion system effectors4e-28123