Pre_GI: BLASTP Hits

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Query: NC_011205:2621415:2622904 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2622904, End: 2623188, Length: 285

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:531208:547673547673547957285Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-37152
NC_012125:1360593:137819013781901378474285Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-37152
NC_011147:529458:545924545924546208285Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-37152
NC_004631:531254:547719547719548003285Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-37152
NC_011083:2542876:254651025465102546794285Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein8e-37152
NC_006511:529424:545890545890546174285Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein8e-37152
NC_003198:2453074:245670924567092456993285Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-37152
NC_011274:2483038:248667424866742486958285Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-36151
NC_011294:2492168:249580324958032496087285Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-36151
NC_016831:531404:547919547919548203285Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-36151
NC_013716:2898434:289991828999182900226309Citrobacter rodentium ICC168, complete genomehypothetical protein3e-36150
NC_008563:2565876:256587625658762566184309Escherichia coli APEC O1, complete genomehypothetical protein4e-35146
NC_011415:2732000:273577227357722736080309Escherichia coli SE11 chromosome, complete genomehypothetical protein9e-35145
NC_013941:2928000:292813029281302928438309Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein9e-35145
NC_000913:2455037:245867224586722458956285Escherichia coli K12, complete genomehypothetical protein7e-35145
AC_000091:2462461:246609624660962466380285Escherichia coli W3110 DNA, complete genomehypothetical protein7e-35145
NC_010473:2548946:255043725504372550721285Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein7e-35145
NC_011742:2489000:248900824890082489292285Escherichia coli S88 chromosome, complete genomehypothetical protein7e-35145
NC_012759:2342986:234447723444772344761285Escherichia coli BW2952 chromosome, complete genomehypothetical protein7e-35145
CP002185:2608000:261239826123982612682285Escherichia coli W, complete genomeconserved protein6e-35145
CP002516:1475521:149317514931751493459285Escherichia coli KO11, complete genomeConserved hypothetical protein CHP007436e-35145
NC_013361:3254000:325847132584713258755285Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-35145
NC_016902:1475521:149317514931751493459285Escherichia coli KO11FL chromosome, complete genomehypothetical protein6e-35145
NC_011748:2655989:265962326596232659907285Escherichia coli 55989, complete genomehypothetical protein2e-34144
CU928145:2655989:265962326596232659907285Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-34144
NC_014618:1452927:146632014663201466604285Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein2e-31134
NC_015968:3277217:328091332809133281197285Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein6e-31132
NC_009436:3117661:312128231212823121566285Enterobacter sp. 638, complete genomehypothetical protein2e-30130
NC_015663:5253242:525685652568565257140285Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein6e-29125
NC_013421:1545386:156362815636281563924297Pectobacterium wasabiae WPP163, complete genomehypothetical protein9e-26115
NC_016513:1720006:173038517303851730675291Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA mismatch repair protein5e-1476.3