Pre_GI: BLASTP Hits

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Query: NC_011205:2462025:2483634 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2483634, End: 2484284, Length: 651

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011083:2375061:241004424100442410694651Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,alpha-ketoglutarate-dependent dioxygenase AlkB2e-119427
NC_003197:2327474:236248123624812363131651Salmonella typhimurium LT2, complete genomeDNA repair system protein1e-118425
NC_006905:2355290:237676523767652377415651Salmonella enterica subsp. enterica serovar Choleraesuis strDNA repair system specific for alkylated DNA1e-118425
NC_016810:2325190:236019723601972360847651Salmonella enterica subsp. enterica serovar Typhimurium strAlkB protein1e-118425
NC_016856:2379027:241403424140342414684651Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA repair system protein1e-118425
NC_016857:2325190:236019723601972360847651Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA repair system protein1e-118425
NC_016860:2323017:235802423580242358674651Salmonella enterica subsp. enterica serovar Typhimurium stralpha-ketoglutarate-dependent dioxygenase AlkB1e-118425
NC_016863:2324293:236222623622262362876651Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA repair system protein1e-118425
NC_017046:2324554:235956123595612360211651Salmonella enterica subsp. enterica serovar Typhimurium str. 798AlkB protein1e-118425
NC_011080:2342672:236424423642442364894651Salmonella enterica subsp. enterica serovar Newport str. SL254,alpha-ketoglutarate-dependent dioxygenase AlkB1e-118425
NC_011149:2294500:231396423139642314614651Salmonella enterica subsp. enterica serovar Agona str. SL483,alpha-ketoglutarate-dependent dioxygenase AlkB3e-118424
NC_011094:2348491:236825923682592368909651Salmonella enterica subsp. enterica serovar Schwarzengrund stralpha-ketoglutarate-dependent dioxygenase AlkB5e-118423
NC_011294:2334979:235654823565482357198651Salmonella enterica subsp. enterica serovar Enteritidis strAlkB protein9e-118422
NC_011274:2325840:234741723474172348067651Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91AlkB protein3e-117420
NC_003198:2297837:231943223194322320082651Salmonella enterica subsp. enterica serovar Typhi str. CT18,AlkB protein3e-117420
NC_014618:1593360:159441815944181595089672Enterobacter cloacae SCF1 chromosome, complete genome2OG-Fe(II) oxygenase5e-86317
NC_013961:2370994:239657423965742397248675Erwinia amylovora, complete genomeAlpha-ketoglutarate-dependent dioxygenase alkB1e-70265
NC_013971:2408522:243410224341022434776675Erwinia amylovora ATCC 49946 chromosome, complete genomealkylated DNA repair protein1e-70265
NC_008800:3955284:396000839600083960673666Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,alkylated DNA repair protein3e-70264
NC_016002:3813039:381303938130393813686648Pseudogulbenkiania sp. NH8B, complete genome2OG-Fe(II) oxygenase8e-70263
NC_015224:3820338:383828338382833838948666Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,alkylated DNA repair protein5e-69260
NC_010002:4175809:417580941758094176468660Delftia acidovorans SPH-1, complete genome2OG-Fe(II) oxygenase1e-63242
NC_015563:3401867:342182434218243422474651Delftia sp. Cs1-4 chromosome, complete genome2OG-Fe(II) oxygenase5e-62237
NC_008009:1264791:127010812701081270752645Acidobacteria bacterium Ellin345, complete genome2OG-Fe(II) oxygenase4e-61234
NC_008314:2686851:268753126875312688193663Ralstonia eutropha H16 chromosome 2, complete sequenceAlkylated DNA repair protein2e-60231
NC_007510:1921251:194244819424481943098651Burkholderia sp. 383 chromosome 1, complete sequence2OG-Fe(II) oxygenase8e-59226
NC_007510:1921251:194723819472381947882645Burkholderia sp. 383 chromosome 1, complete sequence2OG-Fe(II) oxygenase6e-58223
NC_007974:138176:158829158829159413585Ralstonia metallidurans CH34 chromosome 2, complete sequence2OG-Fe(II) oxygenase7e-57220
NC_013595:4951396:495930249593024959943642Streptosporangium roseum DSM 43021, complete genomealkylated DNA repair protein3e-1788.6
NC_010572:3363830:340739834073983408090693Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA repair protein3e-1685.1
NC_017317:134671:140308140308140931624Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein1e-1583.6
NC_015957:6029542:603037860303786031070693Streptomyces violaceusniger Tu 4113 chromosome, complete genome2OG-Fe(II) oxygenase5e-1374.3
NC_013169:612456:644048644048644719672Kytococcus sedentarius DSM 20547, complete genomeDNA-N1-methyladenine dioxygenase9e-1373.6
NC_015859:1099919:110426911042691104940672Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein7e-1270.5
NC_008740:2989856:299458529945852995190606Marinobacter aquaeolei VT8, complete genome2OG-Fe(II) oxygenase9e-0753.5