Pre_GI: BLASTP Hits

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Query: NC_011205:2462025:2466550 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2466550, End: 2467107, Length: 558

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2324554:234248923424892343052564Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-104377
NC_011080:2342672:234718123471812347738558Salmonella enterica subsp. enterica serovar Newport str. SL254,putative outer membrane protein3e-104377
NC_010102:683444:699857699857700414558Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-104377
NC_011083:2375061:239298923929892393546558Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative outer membrane protein3e-104377
NC_016831:687549:703445703445704002558Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-104377
NC_016860:2323017:234095223409522341509558Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-104377
NC_003197:2327474:234540923454092345972564Salmonella typhimurium LT2, complete genomeputative outer membrane protein2e-104377
NC_011294:2334979:233950423395042340067564Salmonella enterica subsp. enterica serovar Enteritidis strexported protein2e-104377
NC_016810:2325190:234312523431252343688564Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-104377
NC_016856:2379027:239696223969622397525564Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane protein2e-104377
NC_016857:2325190:234312523431252343688564Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane protein2e-104377
NC_016863:2324293:234515423451542345717564Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane protein2e-104377
NC_012125:1517925:153435815343581534921564Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane protein1e-103375
NC_011149:2294500:229680322968032297360558Salmonella enterica subsp. enterica serovar Agona str. SL483,putative outer membrane protein3e-103374
NC_006905:2355290:235969323596932360250558Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane protein5e-103373
NC_011274:2325840:233036423303642330927564Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-102370
NC_011094:2348491:235109823510982351655558Salmonella enterica subsp. enterica serovar Schwarzengrund strouter membrane protein4e-102370
NC_011147:682897:699211699211699798588Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-99360
NC_016832:687000:702046702046702306261Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein9e-43172
NC_004631:685357:702092702092702352261Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein9e-43172
NC_003198:2297837:230236123023612302621261Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein9e-43172
NC_006511:682863:699599699599699859261Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein7e-42169