Pre_GI: BLASTP Hits

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Query: NC_011205:2180598:2214834 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2214834, End: 2215358, Length: 525

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:997417:100288810028881003412525Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-69261
NC_011294:2053991:208781920878192088343525Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-69260
NC_016831:947281:955111955111955635525Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-68258
NC_011274:2044000:207894720789472079471525Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-68258
NC_011149:1987291:202790120279012028425525Salmonella enterica subsp. enterica serovar Agona str. SL483,putative endoprotease3e-68257
NC_010645:406794:425035425035425709675Bordetella avium 197N, complete genomephage endoprotease2e-1478.6