Pre_GI: BLASTP Hits

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Query: NC_011205:2180598:2210817 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2210817, End: 2212088, Length: 1272

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2053991:2083802208380220850731272Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein0819
NC_011274:2044000:2074930207493020762011272Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein0816
NC_016831:947281:9583819583819596521272Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein0813
NC_006138:225832:2575292575292588151287Desulfotalea psychrophila LSv54, complete genomehypothetical protein3e-94345
NC_018679:3843870:3854975385497538562461272Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completehypothetical protein3e-94345
NC_011662:2320100:2357815235781523591191305Thauera sp. MZ1T, complete genomehypothetical protein2e-81303
NC_014218:1619982:1637121163712116384281308Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomehypothetical protein1e-74280
NC_013716:5201097:5267206526720652685341329Citrobacter rodentium ICC168, complete genomehypothetical protein6e-74278
NC_011742:4655373:4667904466790446692321329Escherichia coli S88 chromosome, complete genomehypothetical protein7e-74278
NC_004431:4270305:4294419429441942957471329Escherichia coli CFT073, complete genomehypothetical protein7e-74278
NC_008563:4739333:4753242475324247545701329Escherichia coli APEC O1, complete genomehypothetical protein7e-74278
NC_006322:4149500:4159086415908641604381353Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-65250
NC_006270:4149004:4158971415897141603231353Bacillus licheniformis ATCC 14580, complete genomeputative nucleotidyltransferase1e-65250
NC_007164:622000:6306016306016318901290Corynebacterium jeikeium K411, complete genomehypothetical protein2e-63243
NC_008340:420126:429799429799430680882Alkalilimnicola ehrlichei MLHE-1, complete genomehypothetical protein1e-53211
NC_007575:973559:9854939854939867641272Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein5e-45182
NC_010803:1132500:114021111402111141089879Chlorobium limicola DSM 245, complete genomehypothetical protein2e-41169
NC_013165:329185:348708348708349598891Slackia heliotrinireducens DSM 20476, complete genomehypothetical protein1e-39164
NC_017177:192933:1967791967791981401362Clostridium difficile BI1, complete genomeNucleotidyltransferase4e-1892.8
NC_008095:8890464:890747589074758908344870Myxococcus xanthus DK 1622, complete genomehypothetical protein1e-0964.7
NC_017186:7480714:749201074920107492888879Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein5e-0859.3
NC_015563:2018038:202417420241742025046873Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein1e-0757.8
NC_014814:2588628:263147426314742632343870Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein4e-0653.1