Pre_GI: BLASTP Hits

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Query: NC_011205:1186097:1206665 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1206665, End: 1208029, Length: 1365

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:1085447:1106007110600711073981392Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein0820
NC_016831:1905289:1908761190876119101551395Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein0820
NC_011274:1094379:1114918111491811165491632Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein0813
NC_011149:1077589:1093986109398610953471362Salmonella enterica subsp. enterica serovar Agona str. SL483,ImpA domain protein0790
NC_011740:1991941:2008972200897220104771506Escherichia fergusonii ATCC 35469, complete genomehypothetical protein1e-172606
NC_016822:246715:2529252529252542771353Shigella sonnei 53G, complete genomehypothetical protein5e-172604
CP002516:3863932:3869646386964638709981353Escherichia coli KO11, complete genomeImpA domain protein4e-172604
CP002185:234719:2409052409052422571353Escherichia coli W, complete genomeT6SS-associated protein4e-172604
NC_016902:3863932:3869646386964638709981353Escherichia coli KO11FL chromosome, complete genomeImpA domain-containing protein4e-172604
NC_011149:1077589:1090415109041510916501236Salmonella enterica subsp. enterica serovar Agona str. SL483,ImpA domain protein5e-147521
NC_012962:293976:3007953007953021411347Photorhabdus asymbiotica, complete genomehypothetical protein2e-80300
NC_014228:4331327:4336814433681443382141401Xenorhabdus nematophila ATCC 19061, complete genomeConserved Hypothetical protein with ImpA domain (probable component of SST VI cluster)1e-76287
NC_010465:429095:4382594382594395661308Yersinia pseudotuberculosis YPIII, complete genomeImpA domain protein2e-73276
NC_009708:372422:3816133816133829261314Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeImpA domain-containing protein1e-72274
NC_006155:4302826:4314102431410243154151314Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-72274
NC_010634:4234932:4245199424519942465121314Yersinia pseudotuberculosis PB1/+, complete genomeImpA domain-containing protein2e-72273
NC_013892:274297:2885842885842899751392Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-69263
NC_017168:1631052:164021616402161640998783Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-49196
NC_017154:3898925:390808939080893908871783Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-49196
NC_014029:3958811:396797539679753968757783Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-49196
NC_003143:4006884:401604840160484016830783Yersinia pestis CO92, complete genomehypothetical protein3e-49196
NC_017265:4265659:427741042774104278192783Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-49195
NC_009381:222735:231890231890232672783Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-48193
NC_012962:4427000:4429950442995044313201371Photorhabdus asymbiotica, complete genomehypothetical protein1e-39164
NC_008570:2014151:2017683201768320191131431Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeImpA domain protein7e-36152
NC_015968:4117835:4134482413448241358761395Enterobacter asburiae LF7a chromosome, complete genomeImpA domain-containing protein3e-34146
NC_013421:1173051:1176722117672211781581437Pectobacterium wasabiae WPP163, complete genomeImpA domain protein2e-33144
NC_008149:2773139:2793768279376827951351368Yersinia pestis Nepal516, complete genomehypothetical protein8e-32138
NC_004088:2937077:2957706295770629590731368Yersinia pestis KIM, complete genomehypothetical protein8e-32138
NC_009381:1655731:1675037167503716764041368Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-32138
NC_014029:1760948:1763066176306617644331368Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-32138
NC_017168:3948514:3969143396914339705101368Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-32138
NC_017265:2557476:2578105257810525794721368Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein8e-32138
NC_010465:2820500:2838599283859928399661368Yersinia pseudotuberculosis YPIII, complete genomeImpA domain protein1e-31137
NC_009708:2788855:2808154280815428095211368Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeImpA domain-containing protein2e-31136
NC_006155:1807902:1807902180790218092691368Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein6e-30132
NC_011748:3360967:3396575339657533979421368Escherichia coli 55989, complete genomehypothetical protein3e-29130
CU928145:3360967:3396575339657533979421368Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein3e-29130
NC_013961:3269368:3291637329163732930371401Erwinia amylovora, complete genomeCOG3515: Uncharacterized protein conserved in bacteria ImpA-related N-terminal domain2e-29130
NC_013971:465318:4783454783454797451401Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein2e-29130
NC_016514:1627664:1639808163980816411991392Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein3e-27123
NC_009436:3117661:3147681314768131490961416Enterobacter sp. 638, complete genomeImpA domain-containing protein4e-26119
NC_017060:125480:1574611574611588551395Rahnella aquatilis HX2 plasmid PRA1, complete sequenceImpA domain-containing protein9e-26118
NC_005126:349658:379498379498380175678Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-24114
NC_014107:171170:190533190533191132600Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,hypothetical protein7e-24112
NC_014121:1822895:1844710184471018460261317Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein VasL4e-23109
NC_011283:2103500:2123207212320721245921386Klebsiella pneumoniae 342 chromosome, complete genomeImpA domain-containing protein4e-22106
NC_011742:3057444:3062907306290730642831377Escherichia coli S88 chromosome, complete genomehypothetical protein8e-22105
NC_007946:3125577:3131040313104031324161377Escherichia coli UTI89, complete genomehypothetical protein8e-22105
NC_014837:3766426:3785432378543237864751044Pantoea sp. At-9b chromosome, complete genomeImpA domain-containing protein3e-1893.6
NC_009381:222735:232579232579233202624Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-1892.8
NC_008253:2965573:2971228297122829726041377Escherichia coli 536, complete genomehypothetical protein4e-1789.7
NC_017265:4265659:427688042768804277413534Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein8e-1685.1
NC_017154:3898925:390886839088683909401534Yersinia pestis D106004 chromosome, complete genomehypothetical protein8e-1685.1
NC_014029:3958811:396875439687543969287534Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-1685.1
NC_003143:4006884:401682740168274017360534Yersinia pestis CO92, complete genomehypothetical protein8e-1685.1
NC_015963:117178:1209411209411220561116Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencehypothetical protein2e-0654.3