Pre_GI: BLASTP Hits

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Query: NC_011149:4474012:4484870 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 4484870, End: 4485070, Length: 201

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:4486433:449738544973854497585201Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein7e-31132
NC_012125:4481808:449276044927604492960201Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-31132
NC_010102:4477836:448894744889474489147201Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-32135
NC_011083:4547825:455865045586504558850201Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-30130