Pre_GI: BLASTP Hits

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Query: NC_011149:4474012:4481865 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 4481865, End: 4482047, Length: 183

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:4442478:445033344503334450515183Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein8e-2095.9
NC_011083:4547825:455564645556464555828183Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein8e-2095.9
NC_011080:4543000:455085745508574551039183Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-1993.6
NC_010102:4477836:448575244857524486126375Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-1786.7
NC_016831:4367000:437529343752934375475183Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-1685.1
NC_015761:4188250:4202401420240142043801980Salmonella bongori NCTC 12419, complete genomeABC transporter ATP-binding protein3e-1270.5
NC_010067:3204682:3221562322156232235321971Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0961.2
NC_013508:343617:3582713582713602381968Edwardsiella tarda EIB202, complete genomeputative type I secretion protein4e-0650.1