Pre_GI: BLASTP Hits

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Query: NC_011149:3930358:3935465 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 3935465, End: 3936691, Length: 1227

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:3967156:3972272397227239734981227Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein0834
NC_017046:4025998:4031114403111440323821269Salmonella enterica subsp. enterica serovar Typhimurium str. 798ATP/GTP-binding protein0834
NC_011083:4020000:4025180402518040264061227Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,0834
NC_003197:4005857:4010973401097340121991227Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein0834
NC_016810:4027170:4032286403228640335121227Salmonella enterica subsp. enterica serovar Typhimurium strputative ATP/GTP-binding protein0834
NC_016856:4019549:4024665402466540258911227Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein0834
NC_016857:4025767:4032287403228740335131227Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein0834
NC_016860:4110968:4116084411608441173101227Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein0834
NC_011094:3887648:3892763389276338939891227Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein0832
NC_011080:3976441:3981556398155639827821227Salmonella enterica subsp. enterica serovar Newport str. SL254,0830
NC_010102:3955479:3959855395985539610811227Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0829
NC_006905:3942753:3951940395194039531661227Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein0829
NC_012125:3941974:3946734394673439479601227Salmonella enterica subsp. enterica serovar Paratyphi C strainATP/GTP-binding protein0829
NC_011294:3880500:3885629388562938868551227Salmonella enterica subsp. enterica serovar Enteritidis strATP/GTP-binding protein0827
NC_011205:4038884:4043998404399840452241227Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ATP/GTP-binding protein0827
NC_011274:3799696:3812042381204238132681227Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91ATP/GTP-binding protein0826
NC_016831:3779611:3792864379286437940901227Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative ATP/GTP-binding protein0825
NC_006511:3794017:3799131379913138003571227Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative ATP/GTP-binding protein0825
NC_011147:3789696:3794810379481037960361227Salmonella enterica subsp. enterica serovar Paratyphi A strATP/GTP-binding protein0825
NC_016832:3798475:3810813381081338120391227Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0823
NC_003198:3824187:3836526383652638377521227Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative ATP/GTP-binding protein0823
NC_004631:3809678:3822016382201638232421227Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative ATP/GTP-binding protein0823
NC_010067:3753971:3766425376642537676511227Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0808
NC_015761:3698520:3702061370206137032871227Salmonella bongori NCTC 12419, complete genomeATP/GTP-binding protein0789
NC_004337:3590323:3883444388344438847181275Shigella flexneri 2a str. 301, complete genomehypothetical protein0654