Pre_GI: BLASTP Hits

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Query: NC_011149:361765:384437 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 384437, End: 384550, Length: 114

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2581145:258463725846372584792156Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-1579.7
NC_003198:378844:393222393222393377156Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-1579.7
NC_004631:2584244:258773625877362587891156Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-1579.7
NC_011083:403022:448767448767448880114Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-1374.7
NC_006511:2467763:247125624712562471411156Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-1272