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Query: NC_011149:361765:373853 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 373853, End: 374494, Length: 642

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:2627515:263287826328782633519642Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator7e-120429
NC_011274:376970:389044389044389685642Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator7e-120429
NC_011083:403022:438183438183438824642Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative response regulator7e-120429
NC_012125:373630:385705385705386346642Salmonella enterica subsp. enterica serovar Paratyphi C strainresponse regulator2e-119427
NC_010102:2721374:272673727267372727378642Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-119427
NC_011080:383441:395516395516396157642Salmonella enterica subsp. enterica serovar Newport str. SL254,putative response regulator6e-119426
NC_011147:2463299:246859424685942469235642Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator1e-118425
NC_004631:2584244:258953825895382590065528Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible transcriptionl regulator3e-95347
NC_006511:2467763:247305824730582473585528Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible transcriptionl regulator3e-95347
NC_003198:378844:391048391048391575528Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible transcriptionl regulator3e-95347
NC_016832:2581145:258643925864392586885447Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,transcriptionl regulator3e-83307
NC_020064:3998715:404193840419384042582645Serratia marcescens FGI94, complete genomeDNA-binding protein with HTH domain1e-1686.7
NC_006625:1:107011070111333633Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceputative response regulator6e-1270.9
NC_012731:3411161:344578434457843446416633Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeregulator of mucoid phenotype8e-1270.5