Pre_GI: BLASTP Hits

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Query: NC_011149:2912219:2923524 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2923524, End: 2924282, Length: 759

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:3027161:303631230363123037070759Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system apparatus3e-147520
NC_011147:2814664:282507828250782825836759Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island 1 effector protein3e-147520
NC_011094:2913500:292220229222022922960759Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus lipoprotein, YscJ/HrcJ family protein3e-147520
NC_010102:2967464:297797829779782978736759Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-147520
NC_006905:2960260:296852329685232969281759Salmonella enterica subsp. enterica serovar Choleraesuis strcell invasion protein; lipoprotein, may link inner and outer membranes3e-147520
NC_011083:2980356:298951029895102990268759Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus lipoprotein, YscJ/HrcJ family3e-147520
NC_006511:2819128:282954228295422830300759Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpathogenicity 1 island effector protein3e-147520
NC_011080:2982346:299150029915002992258759Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus lipoprotein, YscJ/HrcJ family3e-147520
NC_003197:3005842:301499630149963015754759Salmonella typhimurium LT2, complete genomeneedle complex inner membrane lipoprotein3e-147520
NC_011205:3050235:305938730593873060145759Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus lipoprotein, YscJ/HrcJ family3e-147520
NC_011274:2881306:289046028904602891218759Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity 1 island effector protein3e-147520
NC_016863:2974333:298348629834862984244759Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex inner membrane lipoprotein3e-147520
NC_016860:3029272:303842630384263039184759Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity 1 island effector protein3e-147520
NC_016857:3028421:303757230375723038330759Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex inner membrane lipoprotein3e-147520
NC_016856:3026426:303523330352333035991759Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex inner membrane lipoprotein3e-147520
NC_016831:2867766:287691928769192877677759Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity 1 island effector protein3e-147520
NC_016810:3028421:303757230375723038330759Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus3e-147520
NC_012125:2938519:294890729489072949665759Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity 1 island effector protein3e-147520
NC_011294:2890500:289965528996552900413759Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity 1 island effector protein3e-147520
NC_016832:2829767:284016628401662840924759Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-146517
NC_003198:2856596:286701028670102867768759Salmonella enterica subsp. enterica serovar Typhi str. CT18,pathogenicity 1 island effector protein3e-146517
NC_004631:2842453:285286728528672853625759Salmonella enterica subsp. enterica serovar Typhi Ty2, completepathogenicity 1 island effector protein3e-146517
NC_010067:84093:987409874099498759Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-145513
NC_015761:2726000:273522527352252735983759Salmonella bongori NCTC 12419, complete genomepathogenicity 1 island effector protein2e-144511
NC_011751:3285646:330342933034293304163735Escherichia coli UMN026 chromosome, complete genomeputative type III secretion system lipoprotein EprK6e-64244
NC_013008:3761467:377832737783273779061735Escherichia coli O157:H7 str. TW14359 chromosome, complete genomelipoprotein of type III secretion apparatus1e-63242
NC_011353:3805819:382360138236013824335735Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus lipoprotein EprK1e-63242
NC_002655:3769643:378650437865043787238735Escherichia coli O157:H7 EDL933, complete genomeputative lipoprotein of type III secretion apparatus1e-63242
NC_002695:3702344:371920437192043719938735Escherichia coli O157:H7 str. Sakai, complete genomeEprK1e-63242
CU928145:3196173:321371132137113214445735Escherichia coli 55989 chromosome, complete genomePutative Type III secretion system lipoprotein EprK2e-62238
CU928160:3030324:304786230478623048596735Escherichia coli IAI1 chromosome, complete genomePutative Type III secretion system lipoprotein EprK2e-62238
NC_009801:3175714:319325131932513193985735Escherichia coli E24377A, complete genometype III secretion apparatus lipoprotein EprK2e-62238
NC_011748:3196173:321371132137113214445735Escherichia coli 55989, complete genomePutative Type III secretion system lipoprotein EprK2e-62238
NC_011415:3217796:323533432353343236068735Escherichia coli SE11 chromosome, complete genomeputative lipoprotein of type III secretion apparatus2e-62238
NC_011741:3030324:304786230478623048596735Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion system lipoprotein EprK2e-62238
NC_013361:3867558:388509638850963885830735Escherichia coli O26:H11 str. 11368 chromosome, complete genometype III secretion system lipoprotein EprK2e-62238
NC_013364:3552284:356982835698283570562735Escherichia coli O111:H- str. 11128, complete genometype III secretion system lipoprotein EprK2e-62238
CP002516:903241:918685918685919419735Escherichia coli KO11, complete genome5e-62237
CP002185:3167738:318665731866573187391735Escherichia coli W, complete genome5e-62237
NC_013353:3474077:349161434916143492150537Escherichia coli O103:H2 str. 12009, complete genome5e-43174
AP010958:3474077:349161434916143492150537Escherichia coli O103:H2 str. 12009 DNA, complete genome5e-43174
NC_010468:906957:9224059224059239151511Escherichia coli ATCC 8739, complete genome1e-42173
NC_013961:1622616:163486116348611635640780Erwinia amylovora, complete genomeLipoprotein PrgK precursor4e-40164
NC_013971:1660144:167238916723891673168780Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system lipoprotein4e-40164
NC_010694:2138000:216820521682052168984780Erwinia tasmaniensis, complete genomeType III secretion system9e-37153
NC_012214:2221702:225552622555262256287762Erwinia pyrifoliae Ep1/96, complete genomeType III secretion system2e-36152
NC_013722:1689125:171059617105961711483888Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus protein2e-36152
NC_013961:851044:859553859553860320768Erwinia amylovora, complete genomeLipoprotein PrgK precursor5e-36150
NC_009800:2995958:301629330162933016619327Escherichia coli HS, complete genome4e-30131
NC_005085:2774370:278815527881552788880726Chromobacterium violaceum ATCC 12472, complete genometype III secretion system apparatus lipoprotein3e-22105
NC_014012:2565329:257223625722362572967732Shewanella violacea DSS12, complete genometype III secretion system apparatus lipoprotein1e-21103
NC_009800:2995958:301510830151083015491384Escherichia coli HS, complete genome2e-2099.4
NC_011094:1435347:145418114541811454930750Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus lipoprotein, YscJ/HrcJ family protein3e-1892
NC_004631:1325817:134468313446831345432750Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island lipoprotein2e-1789.7
NC_003198:1621347:163570416357041636453750Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island lipoprotein2e-1789.7
NC_011083:1476894:149579214957921496541750Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus lipoprotein, YscJ/HrcJ family2e-1789.4
NC_006905:1509093:152796515279651528714750Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaJ2e-1789.4
NC_011080:1470794:148971714897171490466750Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus lipoprotein, YscJ/HrcJ family2e-1789.4
NC_011149:1710601:172495817249581725707750Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus lipoprotein, YscJ/HrcJ family2e-1789.4
NC_006511:1506915:152127215212721522021750Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island lipoprotein7e-1787.8
NC_011147:1502096:151645315164531517202750Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island lipoprotein7e-1787.8
NC_011205:1852665:186702218670221867771750Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus lipoprotein, YscJ/HrcJ family7e-1787.8
NC_011294:1723852:173820917382091738958750Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island lipoprotein7e-1787.8
NC_016860:1469066:148796414879641488713750Salmonella enterica subsp. enterica serovar Typhimurium strneedle complex inner membrane lipoprotein7e-1787.8
NC_003197:1471349:149027714902771491026750Salmonella typhimurium LT2, complete genomeneedle complex inner membrane lipoprotein7e-1787.8
NC_016810:1428201:144712914471291447878750Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island lipoprotein7e-1787.8
NC_016856:1481325:150025315002531501002750Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex inner membrane lipoprotein7e-1787.8
NC_016857:1428201:144712914471291447878750Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex inner membrane lipoprotein7e-1787.8
NC_016863:1429516:144844414484441449193750Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex inner membrane lipoprotein7e-1787.8
NC_007645:3343815:334381533438153344612798Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, lipoprotein EscJ1e-1687
NC_011274:1763676:177803317780331778782750Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island lipoprotein2e-1686.3
NC_017249:8283701:828971882897188290581864Bradyrhizobium japonicum USDA 6, complete genomeRhcJ protein3e-1685.9
NC_010688:3487000:350844835084483509212765Xanthomonas campestris pv. campestris, complete genomeHrcJ protein3e-1685.9
NC_009439:20545:275242752428342819Pseudomonas mendocina ymp, complete genomeYscJ/HrcJ family type III secretion apparatus lipoprotein1e-1584
NC_010067:1507823:152575715257571526506750Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1583.6
NC_016832:1324820:134371613437161344405690Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secretion system apparatus lipoprotein ssaJ5e-1581.6
NC_012125:2360815:237517223751722375861690Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island lipoprotein5e-1581.3
NC_010102:1616530:163088716308871631576690Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-1581.3
NC_012779:916000:931839931839932570732Edwardsiella ictaluri 93-146, complete genometype III secretion apparatus lipoprotein, YscJ/HrcJ family, putative8e-1580.9
NC_013361:5319497:534306153430615343633573Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscJ1e-1480.5
NC_013353:3669500:370024737002473700819573Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscJ1e-1480.5
AP010958:3669500:370024737002473700819573Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscJ1e-1480.5
NC_017046:1428272:144726014472601447949690Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island lipoprotein1e-1480.1
NC_016831:1236786:125571012557101256399690Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island lipoprotein9e-1477.4
NC_003919:457482:479630479630480391762Xanthomonas axonopodis pv. citri str. 306, complete genomeHrcJ protein1e-1376.6
NC_012660:819381:827789827789828604816Pseudomonas fluorescens SBW25 chromosome, complete genomeputative type III secretion protein6e-1374.7
NC_002695:4584177:461034346103434610915573Escherichia coli O157:H7 str. Sakai, complete genomeEscJ5e-1374.7
NC_002655:4653160:467932646793264679898573Escherichia coli O157:H7 EDL933, complete genomeescJ5e-1374.7
NC_011353:4688000:471344747134474714019573Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus lipoprotein, YscJ/HrcJ family5e-1374.7
NC_011601:4096427:412410841241084124680573Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscJ5e-1374.7
NC_013008:4643825:466948846694884670060573Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor5e-1374.7
NC_013364:3701895:374174937417493742321573Escherichia coli O111:H- str. 11128, complete genomeT3SS structure protein EscJ5e-1374.7
NC_013941:4470932:449784744978474498419573Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeEscJ5e-1374.7
NC_002678:5139557:515537151553715156210840Mesorhizobium loti MAFF303099, complete genomeNODULATION PROTEIN NOLT5e-1271.6
NC_020209:47504:104511104511104900390Pseudomonas poae RE*1-1-14, complete genometype III secretion apparatus lipoprotein RscJ4e-0858.9
NC_020064:4125500:414224441422444143014771Serratia marcescens FGI94, complete genometype III secretion apparatus lipoprotein, YscJ/HrcJ family4e-0858.5
NC_020126:8080574:809283880928388093644807Myxococcus stipitatus DSM 14675, complete genomeYscJ/FliF family type III secretion lipoprotein1e-0757
NC_014366:2513352:252556525255652526299735Gamma proteobacterium HdN1, complete genomeType III secretion pathway protein2e-0756.2