Pre_GI: BLASTP Hits

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Query: NC_011149:2294500:2311240 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2311240, End: 2311371, Length: 132

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:683444:685935685935686066132Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-1889
NC_016832:687000:687828687828687959132Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-1786.7
NC_016856:2379027:241131024113102411441132Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein6e-1785.9