Pre_GI: BLASTP Hits

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Query: NC_011149:2179592:2187440 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2187440, End: 2188159, Length: 720

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1632150:165045016504501651169720Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein9e-131466
NC_006905:2235607:224204322420432242762720Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-130465
NC_011147:792489:808445808445809128684Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-127452
NC_006511:792543:808499808499809182684Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-127452
NC_003198:2179688:218752121875212188240720Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-125447
NC_004631:799810:815696815696816415720Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-125447
NC_016832:799764:815650815650816255606Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-110398
NC_020064:3790472:379113737911373791844708Serratia marcescens FGI94, complete genomehypothetical protein2e-48192