Pre_GI: BLASTP Hits

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Query: NC_011149:2040396:2060811 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2060811, End: 2061548, Length: 738

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:2061000:208249920824992083236738Salmonella enterica subsp. enterica serovar Schwarzengrund strcobalt transport protein CbiM1e-100365
NC_013892:853366:858073858073858804732Xenorhabdus bovienii SS-2004 chromosome, complete genomeprotein cbiM3e-71268
NC_009089:370555:391385391385392137753Clostridium difficile 630, complete genomeputative cobalt transport protein2e-49196
NC_013316:371953:392790392790393542753Clostridium difficile R20291, complete genomeputative cobalt transport protein2e-48192
NC_015565:348941:348941348941349687747Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecobalamin biosynthesis protein CbiM6e-46184
NC_015573:2900906:290293629029362903679744Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomecobalamin biosynthesis protein CbiM1e-42172
NC_019757:4293000:430997043099704310755786Cylindrospermum stagnale PCC 7417, complete genomecobalamin biosynthesis protein CbiM6e-42170
NC_016627:4203775:422701642270164227756741Clostridium clariflavum DSM 19732 chromosome, complete genomecobalamin biosynthesis protein CbiM8e-42170
NC_011898:1558208:157154115715411572287747Clostridium cellulolyticum H10, complete genomecobalamin biosynthesis protein CbiM1e-39163
NC_013517:1055854:109035710903571091067711Sebaldella termitidis ATCC 33386, complete genomecobalamin biosynthesis protein CbiM3e-39162
NC_016791:1132451:113478211347821135528747Clostridium sp. BNL1100 chromosome, complete genomecobalamin biosynthesis protein CbiM4e-38157
NC_004557:749330:749330749330750055726Clostridium tetani E88, complete genomecobalt transport protein CbiM2e-37155
NC_007298:1824335:182433518243351825012678Dechloromonas aromatica RCB, complete genomecobalt transport protein CbiM3e-37155
NC_007955:1779222:178356317835631784258696Methanococcoides burtonii DSM 6242, complete genomecobalamin biosynthesis protein CbiM2e-35149
NC_013192:63111:899608996090667708Leptotrichia buccalis DSM 1135, complete genomecobalamin biosynthesis protein CbiM2e-35149
NC_007796:3492438:350962335096233510312690Methanospirillum hungatei JF-1, complete genomecobalamin biosynthesis protein CbiM3e-33142
NC_010001:1702350:172616917261691726921753Clostridium phytofermentans ISDg, complete genomecobalamin biosynthesis protein CbiM8e-33140
NC_014734:3086165:309020030902003090943744Paludibacter propionicigenes WB4 chromosome, complete genomecobalamin biosynthesis protein cbim7e-32137
NC_017295:1507956:150967715096771510348672Clostridium acetobutylicum EA 2018 chromosome, complete genomecobalt transport protein CbiM2e-1686.3
NC_003030:1510000:151026315102631510934672Clostridium acetobutylicum ATCC 824, complete genomecobalt transport protein CbiM2e-1686.3
NC_015687:1508664:151186415118641512535672Clostridium acetobutylicum DSM 1731 chromosome, complete genomecobalt transport protein CbiM2e-1686.3