Pre_GI: BLASTP Hits

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Query: NC_011149:2040396:2060528 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2060528, End: 2060809, Length: 282

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:2061000:208221620822162082497282Salmonella enterica subsp. enterica serovar Schwarzengrund strcobalt transport protein CbiN6e-42169
NC_013892:853366:857779857779858060282Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalt transporter cbiN1e-28125
NC_009089:370555:392127392127392411285Clostridium difficile 630, complete genomecobalt transport protein8e-2095.5
NC_013316:371953:393532393532393816285Clostridium difficile R20291, complete genomecobalt transport protein3e-1994
NC_016627:4203775:422668742266874227013327Clostridium clariflavum DSM 19732 chromosome, complete genomecobalt transport protein8e-1889
NC_013517:1055854:109106810910681091355288Sebaldella termitidis ATCC 33386, complete genomeCobalt transport protein CbiN4e-1683.2
NC_011898:1558208:157230315723031572596294Clostridium cellulolyticum H10, complete genomecobalt transport protein8e-1682.4
NC_015573:2900906:290263629026362902932297Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeCobalt transport protein cbiN8e-1682.4
NC_016791:1132451:113554211355421135835294Clostridium sp. BNL1100 chromosome, complete genomecobalt ABC transporter substrate-binding protein1e-1375.5
NC_013192:63111:906679066790969303Leptotrichia buccalis DSM 1135, complete genomeCobalt transport protein CbiN4e-1373.2
NC_007298:1824335:182398818239881824338351Dechloromonas aromatica RCB, complete genomecobalt transport protein CbiN1e-1271.6
NC_014734:3086165:309094430909443091231288Paludibacter propionicigenes WB4 chromosome, complete genomecobalt transport protein cbin4e-1063.5
NC_007955:1779222:178326717832671783566300Methanococcoides burtonii DSM 6242, complete genomecobalt transport binding protein5e-0959.7
NC_010001:1702350:172692117269211727253333Clostridium phytofermentans ISDg, complete genomeCobalt transport protein CbiN1e-0858.5