Pre_GI: BLASTP Hits

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Query: NC_011149:2040396:2059864 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2059864, End: 2060541, Length: 678

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007955:1779222:178237817823781783160783Methanococcoides burtonii DSM 6242, complete genomeCobalt ABC transporter CbiQ, inner membrane subunit1e-1480.1
NC_007796:3492438:351063235106323511411780Methanospirillum hungatei JF-1, complete genomeCobalt ABC transporter CbiQ, permease subunit3e-0962
NC_016791:1132451:113583211358321136611780Clostridium sp. BNL1100 chromosome, complete genomecobalt ABC transporter permease CbiQ1e-21103
NC_016627:4203775:422591442259144226690777Clostridium clariflavum DSM 19732 chromosome, complete genomecobalt ABC transporter permease CbiQ3e-30132
NC_011094:2061000:208155220815522082229678Salmonella enterica subsp. enterica serovar Schwarzengrund strcobalt ABC transporter permease CbiQ3e-125447
NC_013192:63111:909569095691648693Leptotrichia buccalis DSM 1135, complete genomecobalt ABC transporter, inner membrane subunit CbiQ8e-0857.4
NC_011898:1558208:157259315725931573372780Clostridium cellulolyticum H10, complete genomecobalt ABC transporter, inner membrane subunit CbiQ3e-22105
NC_015573:2900906:290182629018262902608783Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomecobalt ABC transporter, inner membrane subunit CbiQ9e-1787
NC_014734:3086165:309123430912343092019786Paludibacter propionicigenes WB4 chromosome, complete genomecobalt ABC transporter, inner membrane subunit cbiq3e-2098.6
NC_010001:1702350:172432717243271725226900Clostridium phytofermentans ISDg, complete genomecobalt ABC transporter, inner membrane subunit CbiQ2e-1272.4
NC_019757:4293000:430887943088794309688810Cylindrospermum stagnale PCC 7417, complete genomecobalt ABC transporter, permease protein CbiQ5e-1581.3
NC_013316:371953:393819393819394517699Clostridium difficile R20291, complete genomecobalt transport protein5e-32137
NC_014614:284005:312287312287312982696Clostridium sticklandii, complete genomeCobalt transport protein3e-35148
NC_013517:1055854:109134210913421092031690Sebaldella termitidis ATCC 33386, complete genomecobalt transport protein5e-0857.8
NC_009089:370555:392414392414393112699Clostridium difficile 630, complete genomecobalt transport protein2e-31135
NC_011060:459615:480347480347481114768Pelodictyon phaeoclathratiforme BU-1, complete genomecobalt transport protein2e-0652.8
NC_013892:853366:857115857115857792678Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalt transporter cbiQ2e-69261