Pre_GI: BLASTP Hits

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Query: NC_011149:2040396:2056241 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2056241, End: 2056963, Length: 723

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:948054:948054948054948797744Salmonella enterica subsp. enterica serovar Typhi Ty2, completecobalamin synthase7e-96350
NC_016832:948029:948029948029948751723Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cobalamin synthase7e-96350
NC_011094:2061000:207792920779292078672744Salmonella enterica subsp. enterica serovar Schwarzengrund strcobalamin synthase2e-95348
NC_016822:2201388:224259522425952243338744Shigella sonnei 53G, complete genomecobalamin synthase7e-86317
NC_009800:2083465:210308121030812103824744Escherichia coli HS, complete genomecobalamin 5'-phosphate synthase7e-86317
NC_007946:2155454:217053221705322171311780Escherichia coli UTI89, complete genomecobalamin 5'-phosphate synthase / cobalamin synthase1e-85316
NC_004431:2304280:231936723193672320146780Escherichia coli CFT073, complete genomecobalamin synthase1e-85316
NC_008253:2056734:207184420718442072587744Escherichia coli 536, complete genomecobalamin [5'-phosphate] synthase8e-86316
CP002797:2062006:206546920654692066212744Escherichia coli NA114, complete genomeCobalamin synthase8e-86316
NC_011601:2139188:217951421795142180257744Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomecobalamin synthase2e-85315
NC_013353:2455052:245956624595662460309744Escherichia coli O103:H2 str. 12009, complete genomecobalamin 5'-phosphate synthase2e-85315
AP010958:2455052:245956624595662460309744Escherichia coli O103:H2 str. 12009 DNA, complete genomecobalamin 5'-phosphate synthase2e-85315
AC_000091:2027648:206661620666162067359744Escherichia coli W3110 DNA, complete genomecobalamin 5'-phosphate synthase1e-84312
NC_010473:2119480:215351121535112154254744Escherichia coli str. K-12 substr. DH10B, complete genomecobalamin 5'-phosphate synthase1e-84312
NC_000913:2042935:206250320625032063246744Escherichia coli K12, complete genomecobalamin synthase1e-84312
NC_011745:2209288:227152022715202272263744Escherichia coli ED1a chromosome, complete genomecobalamin synthase1e-84312
NC_012759:1920955:195498619549861955729744Escherichia coli BW2952 chromosome, complete genomecobalamin synthase1e-84312
NC_012947:1769438:176943817694381770181744Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecobalamin synthase1e-84312
NC_012967:1967675:200247920024792003222744Escherichia coli B str. REL606 chromosome, complete genomecobalamin synthase1e-84312
NC_010468:1816359:181690118169011817644744Escherichia coli ATCC 8739, complete genomecobalamin 5'-phosphate synthase6e-84310
NC_015663:4950000:495002249500224950762741Enterobacter aerogenes KCTC 2190 chromosome, complete genomecobalamin synthase5e-66250
NC_012962:1827000:184286118428611843607747Photorhabdus asymbiotica, complete genomecobalamin synthase1e-53209
NC_005126:3485330:348739834873983488144747Photorhabdus luminescens subsp. laumondii TTO1, complete genomecobalamin synthase3e-47188
NC_013892:853366:853366853366854124759Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalamin 5'-phosphate synthase1e-40166
NC_017068:1327025:132803813280381328793756Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative cobalamin 5'-phosphate synthase7e-28124
NC_016751:1700164:171404017140401714780741Marinitoga piezophila KA3 chromosome, complete genomecobalamin 5''-phosphate synthase/cobalamin synthase2e-1892.4
NC_017295:1507956:152574015257401526498759Clostridium acetobutylicum EA 2018 chromosome, complete genomecobalamin synthase5e-1891.3
NC_015687:1508664:152792715279271528685759Clostridium acetobutylicum DSM 1731 chromosome, complete genomecobalamin synthase5e-1891.3
NC_003030:1510000:152632615263261527084759Clostridium acetobutylicum ATCC 824, complete genomecobalamin synthase5e-1891.3
NC_016148:141011:156052156052156792741Thermovirga lienii DSM 17291 chromosome, complete genomecobalamin 5'-phosphate synthase9e-1890.5
NC_014632:567289:578648578648579397750Ilyobacter polytropus DSM 2926 chromosome, complete genomecobalamin-5'-phosphate synthase9e-1890.5
NC_013517:1055854:108700010870001087728729Sebaldella termitidis ATCC 33386, complete genomecobalamin 5'-phosphate synthase2e-1789.7
NC_013766:1202713:120271312027131203459747Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein1e-1789.7
NC_012488:1159463:116075811607581161504747Listeria monocytogenes Clip81459, complete genomecobalamin (5'-phosphatase) synthetase1e-1686.7
NC_009253:2927802:293128329312832932032750Desulfotomaculum reducens MI-1 chromosome, complete genomecobalamin 5'-phosphate synthase4e-1685.1
NC_015565:624298:642658642658643407750Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecobalamin synthase4e-1581.6
NC_011989:1638261:165857716585771659356780Agrobacterium vitis S4 chromosome 1, complete sequencecobalamin synthase1e-1480.5
NC_015437:1038476:104171310417131042540828Selenomonas sputigena ATCC 35185 chromosome, complete genomeCobalamin synthase2e-1375.9
NC_010506:4951500:495452049545204955293774Shewanella woodyi ATCC 51908, complete genomecobalamin 5'-phosphate synthase6e-1374.3
NC_011296:1151346:115281211528121153594783Thermodesulfovibrio yellowstonii DSM 11347, complete genomecobalamin 5'-phosphate synthase3e-1272
NC_008321:977500:998408998408999196789Shewanella sp. MR-4, complete genomecobalamin 5'-phosphate synthase9e-1270.5
NC_016629:1175828:117755611775561178284729Desulfovibrio africanus str. Walvis Bay chromosome, completecobalamin synthase9e-1270.5
NC_009831:4539952:454054845405484541321774Shewanella sediminis HAW-EB3, complete genomecobalamin 5'-phosphate synthase9e-1167.4
NC_003228:2929006:293420229342022934945744Bacteroides fragilis NCTC 9343, complete genomeputative cobalamin 5'-phosphate synthase2e-1065.9
NC_015497:3794000:381461038146103815419810Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecobalamin 5'-phosphate synthase3e-1065.9
NC_016776:2913966:291916229191622919905744Bacteroides fragilis 638R, complete genomeputative cobalamin 5'-phosphate synthase3e-1065.5
NC_007481:3167434:318663331866333187457825Pseudoalteromonas haloplanktis TAC125 chromosome I, completecobalamin 5'-phosphate synthase5e-1064.7
NC_012491:1263469:126851212685121269252741Brevibacillus brevis NBRC 100599, complete genomecobalamin (5'-phosphate) synthase7e-1064.3
NC_011894:3885490:388549038854903886362873Methylobacterium nodulans ORS 2060, complete genomecobalamin 5'-phosphate synthase1e-0963.2
NC_012969:142000:161076161076161837762Methylovorus glucosetrophus SIP3-4 chromosome, complete genomecobalamin 5'-phosphate synthase1e-0963.2
NC_007643:791500:791573791573792358786Rhodospirillum rubrum ATCC 11170, complete genomeCobalamin-5-phosphate synthase CobS4e-0962
NC_014484:762710:782444782444783235792Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein4e-0962
NC_014844:762794:763861763861764598738Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomecobalamin-5-phosphate synthase CobS1e-0860.1
NC_014622:1514416:152548615254861526355870Paenibacillus polymyxa SC2 chromosome, complete genomecobalamin synthase2e-0859.7
NC_014483:1376500:138773413877341388603870Paenibacillus polymyxa E681 chromosome, complete genomeCobalamin synthase2e-0859.3
NC_016641:3173250:318504931850493185915867Paenibacillus terrae HPL-003 chromosome, complete genomecobalamin synthase2e-0859.3
NC_006085:481231:487055487055487942888Propionibacterium acnes KPA171202, complete genomeputative cobalamin-5-phosphate synthase, CobS4e-0858.5
NC_016511:472666:478541478541479380840Propionibacterium acnes TypeIA2 P.acn31 chromosome, completecobalamin-5-phosphate synthase, CobS4e-0858.5
NC_014039:499233:505099505099505944846Propionibacterium acnes SK137 chromosome, complete genomecobalamin-5-phosphate synthase3e-0858.5
NC_007951:1042291:106407510640751064851777Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative cobalamin-5-phosphate synthase5e-0858.2
NC_021171:415771:435245435245435985741Bacillus sp. 1NLA3E, complete genomecobalamin (5'-phosphate) synthase6e-0858.2
NC_016516:463460:469338469338470177840Propionibacterium acnes TypeIA2 P.acn33 chromosome, completecobalamin-5-phosphate synthase, CobS1e-0757.4
NC_013854:2714033:273312227331222733970849Azospirillum sp. B510, complete genomecobalamin synthase7e-0754.3
NC_019673:1656680:166097216609721661685714Saccharothrix espanaensis DSM 44229 complete genomeCobalamin 5'-phosphate synthase3e-0652.4
NC_008148:672608:682230682230683000771Rubrobacter xylanophilus DSM 9941, complete genomecobalamin 5'-phosphate synthase5e-0651.6