Pre_GI: BLASTP Hits

Some Help

Query: NC_011149:1870931:1896997 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1896997, End: 1898118, Length: 1122

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:1896168:1921558192155819226791122Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein0731
NC_011274:1928939:1954325195432519554461122Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein0731
NC_012125:2531817:2557167255716725583181152Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein0730
NC_011205:2024458:2049856204985620509771122Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cupin family protein0728
NC_013353:1305712:1324686132468613258161131Escherichia coli O103:H2 str. 12009, complete genomecytoplasmic protein0698
AP010958:1305712:1324686132468613258161131Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative cytoplasmic protein0698
NC_013364:1477248:1497169149716914982901122Escherichia coli O111:H- str. 11128, complete genomehypothetical protein0698
NC_002655:1655944:1677357167735716784871131Escherichia coli O157:H7 EDL933, complete genomehypothetical protein0697
NC_010498:1995500:2018270201827020193911122Escherichia coli SMS-3-5, complete genomecupin family protein0697
NC_012947:2566754:2590777259077725918981122Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecupin0697
NC_013716:1298932:1320238132023813213591122Citrobacter rodentium ICC168, complete genomehypothetical protein0697
NC_013008:1513000:1534597153459715357181122Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein0696
NC_011353:1513000:1534309153430915354301122Escherichia coli O157:H7 str. EC4115 chromosome, complete genomecupin family protein0696
NC_002695:1571389:1593381159338115945021122Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein0696
CP002516:2786000:2809548280954828106691122Escherichia coli KO11, complete genometranscription factor jumonji jmjC domain-containing protein0694
NC_016902:2786000:2809548280954828106691122Escherichia coli KO11FL chromosome, complete genometranscription factor jumonji jmjC domain-containing protein0694
NC_014121:2514544:2553535255353525546561122Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecupin 4 family protein0653
NC_013850:3340882:3372171337217133732921122Klebsiella variicola At-22 chromosome, complete genomeCupin 4 family protein0649
NC_020211:2206500:2219358221935822204791122Serratia marcescens WW4, complete genomecupin superfamily protein1e-167589
NC_020418:2910593:2932028293202829331491122Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-141502
NC_015224:1440283:1443279144327914444001122Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein9e-140496
NC_008800:3279468:3293587329358732947081122Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein8e-140496
NC_012880:1613485:1618086161808616192101125Dickeya dadantii Ech703, complete genomeCupin 4 family protein1e-138492
NC_004547:442927:4760144760144771351122Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-138491
NC_015968:511282:5391045391045402251122Enterobacter asburiae LF7a chromosome, complete genomeCupin 4 family protein9e-138489
NC_012752:1:5253525363561104Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidhypothetical protein1e-71270
NC_014733:1857020:1863047186304718641981152Methylovorus sp. MP688 chromosome, complete genomecupin 4 family protein8e-59228
NC_021150:2906471:2923685292368529248511167Azotobacter vinelandii CA6, complete genomeclavaminate synthase-like superfamily protein7e-59228
NC_012560:2906459:2923673292367329248391167Azotobacter vinelandii DJ, complete genomeclavaminate synthase-like superfamily protein7e-59228
NC_010995:2855595:2858987285898728601771191Cellvibrio japonicus Ueda107, complete genomehypothetical protein6e-53208
NC_010804:2206000:2224160222416022253861227Burkholderia multivorans ATCC 17616 chromosome 1, completecupin superfamily protein2e-48192
NC_010084:1299387:1299387129938713006131227Burkholderia multivorans ATCC 17616 chromosome 1, completecupin 4 family protein2e-48192
NC_003143:3115933:312811131281113128461351Yersinia pestis CO92, complete genomeconserved hypothetical protein (partial)5e-22105
NC_008150:2822689:283438328343832834691309Yersinia pestis Antiqua, complete genomehypothetical protein3e-1582.8
NC_004088:1265730:127273912727391273047309Yersinia pestis KIM, complete genomehypothetical protein3e-1582.8
NC_008149:1195614:120262312026231202931309Yersinia pestis Nepal516, complete genomehypothetical protein3e-1582.8
NC_005810:1230976:124134612413461241654309Yersinia pestis biovar Microtus str. 91001, complete genome3e-1582.8
NC_014029:3245778:325278732527873253095309Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-1582.8
NC_017154:3188795:319580431958043196112309Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-1582.8
NC_017168:2626996:263400526340052634313309Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-1582.8
NC_013929:10950:2335223352245241173Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-0654.7