Pre_GI: BLASTP Hits

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Query: NC_011149:1870931:1881781 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1881781, End: 1881972, Length: 192

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:1282385:129814512981451298336192Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-1993.6
NC_016832:1182496:119761411976141197778165Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-1375.1
NC_003198:1771432:178232617823261782490165Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-1375.1
NC_004631:1182883:119864211986421198806165Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-1375.1
NC_011147:1650142:166017516601751660339165Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-1168.2
NC_006511:1654959:166499216649921665156165Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-1168.2