Pre_GI: BLASTP Hits

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Query: NC_011149:1870931:1878573 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1878573, End: 1878698, Length: 126

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:1282385:130141913014191301544126Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-1685.1
NC_010102:1779707:178734917873491787474126Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1582
NC_006905:1342474:136638613663861366511126Salmonella enterica subsp. enterica serovar Choleraesuis strputative lipoprotein1e-1582
NC_011205:2024458:203210120321012032226126Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-1582
NC_012125:2531817:253946025394602539585126Salmonella enterica subsp. enterica serovar Paratyphi C strainlipoprotein1e-1582
NC_016831:1083871:109777610977761097901126Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative lipoprotein1e-1582
NC_016856:1326503:134474213447421344867126Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative lipoprotein1e-1582
NC_016857:1276340:129162012916201291745126Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative lipoprotein1e-1582
NC_016860:1317174:133245413324541332579126Salmonella enterica subsp. enterica serovar Typhimurium strputative lipoprotein1e-1582
NC_011083:1323827:133980913398091339934126Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-1581.6
NC_011080:1321268:133654313365431336668126Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein1e-1581.6
NC_003198:1771432:177909617790961779221126Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative lipoprotein1e-1581.6
NC_004631:1182883:120191112019111202036126Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative lipoprotein1e-1581.6
NC_016832:1182496:120088312008831201008126Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-1581.6
NC_010067:1655815:166349716634971663622126Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-1580.5
NC_015761:1181186:121308012130801213205126Salmonella bongori NCTC 12419, complete genomelipoprotein4e-1580.1