Pre_GI: BLASTP Hits

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Query: NC_011149:1710601:1729533 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1729533, End: 1730987, Length: 1455

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:1616530:1635462163546216369161455Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0866
NC_011147:1502096:1521028152102815224821455Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island effector protein0860
NC_006511:1506915:1525847152584715273011455Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island effector protein0860
NC_003198:1621347:1640279164027916417331455Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island effector protein0853
NC_004631:1325817:1339403133940313408571455Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island effector protein0853
NC_016832:1324820:1338376133837613398301455Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secreted effector protein sseC0853
NC_006905:1509093:1522685152268515241391455Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system effector SseC0848
NC_012125:2360815:2379747237974723812011455Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island effector protein0844
NC_003197:1471349:1484997148499714864511455Salmonella typhimurium LT2, complete genometranslocation machinery component0830
NC_016810:1428201:1441849144184914433031455Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island effector protein0830
NC_016856:1481325:1494973149497314964271455Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stranslocation machinery component0830
NC_016857:1428201:1441849144184914433031455Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74translocation machinery component0830
NC_016860:1469066:1482684148268414841381455Salmonella enterica subsp. enterica serovar Typhimurium strtranslocation machinery component0830
NC_016863:1429516:1443164144316414446181455Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1translocation machinery component0830
NC_011294:1723852:1742784174278417442381455Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island effector protein0827
NC_011094:1435347:1448902144890214503561455Salmonella enterica subsp. enterica serovar Schwarzengrund strtranslocation machinery component0827
NC_011080:1470794:1484437148443714858911455Salmonella enterica subsp. enterica serovar Newport str. SL254,translocation machinery component0825
NC_011083:1476894:1490512149051214919661455Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,translocation machinery component0824
NC_016831:1236786:1250370125037012518241455Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island effector protein0823
NC_011205:1852665:1871597187159718730511455Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853translocation machinery component0823
NC_011274:1763676:1782608178260817840621455Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island effector protein0815
NC_017046:1428272:1442037144203714433741338Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island effector protein0746
NC_010067:1507823:1530355153035515316921338Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0637
NC_014012:2565329:2580410258041025818941485Shewanella violacea DSS12, complete genomesecretion system effector, putative5e-60232
NC_005085:2774370:2780861278086127823481488Chromobacterium violaceum ATCC 12472, complete genomesecretion system effector2e-32140