Pre_GI: BLASTP Hits

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Query: NC_011149:1429523:1465303 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1465303, End: 1465569, Length: 267

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016514:2476359:247635924763592476625267Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein4e-40163
NC_014121:1848971:186880718688071869073267Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative cytoplasmic protein4e-40163
NC_011294:1465500:148734714873471487502156Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-21100
NC_008800:2298000:229805622980562298373318Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative lipoprotein2e-1167.4
NC_012917:2641000:264390826439082644198291Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein1e-1065.5
NC_013508:1862896:188496918849691885211243Edwardsiella tarda EIB202, complete genomehypothetical protein4e-0960.1