Pre_GI: BLASTP Hits

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Query: NC_011149:1236689:1243060 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1243060, End: 1243479, Length: 420

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006625:63342:760137601376432420Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequencehypothetical protein9e-68254
NC_013283:113660:923392339652420Cronobacter turicensis plasmid pCTU1, complete sequenceUncharacterized HTH-type transcriptional regulator ygjM4e-66249
NC_014121:3188928:319711431971143197533420Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative DNA-binding protein1e-39161
NC_011080:4177443:419997741999774200405429Salmonella enterica subsp. enterica serovar Newport str. SL254,Sea416e-30129
NC_015381:2859000:291248129124812912897417Burkholderia gladioli BSR3 chromosome 1, complete sequenceHTH domain DNA binding protein4e-22103
NC_004129:3123000:313270031327003133338639Pseudomonas fluorescens Pf-5, complete genomehypothetical protein4e-0960.1
NC_016830:4809210:481699548169954817483489Pseudomonas fluorescens F113 chromosome, complete genomehelix-turn-helix dna-binding domain protein4e-0960.1
NC_012796:4075583:4134464413446441356391176Desulfovibrio magneticus RS-1, complete genomeXre family DNA-binding protein8e-0855.8
NC_013959:2801557:281770628177062818107402Sideroxydans lithotrophicus ES-1 chromosome, complete genometranscriptional regulator, XRE family9e-0855.5
NC_014305:66500:830278302783185159Erwinia billingiae Eb661 plasmid pEB170, complete sequencePutative HTH-type transcriptional regulator1e-0755.5
NC_012560:3282704:329448232944823294685204Azotobacter vinelandii DJ, complete genomehypothetical protein5e-0753.1
NC_021150:3282702:329448032944803294683204Azotobacter vinelandii CA6, complete genomehypothetical protein5e-0753.1
NC_010602:2244729:228503322850332285434402Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'hypothetical protein1e-0652
NC_010842:2250119:229041922904192290820402Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeTranscription regulator containing HTH domain1e-0652
NC_013850:2182337:219376921937692194347579Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, XRE family3e-0650.4