Pre_GI: BLASTP Hits

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Query: NC_011149:1077589:1092622 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1092622, End: 1093464, Length: 843

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016845:575123:596701596701597375675Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-26120
NC_012917:1840172:187728018772801877921642Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein3e-2099.4
NC_016612:5600177:561420456142045614845642Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein8e-1787.8
NC_008800:2695977:272842527284252729084660Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-1686.3
NC_015224:2017781:202422120242212024616396Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein5e-0755.1
NC_014562:3985500:398900139890013989642642Pantoea vagans C9-1 chromosome, complete genomehypothetical protein2e-0653.1