Pre_GI: BLASTP Hits

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Query: NC_011149:1077589:1091793 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1091793, End: 1092053, Length: 261

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:1085447:1107409110740911100272619Salmonella enterica subsp. enterica serovar Enteritidis str4e-44176
NC_011274:1094379:1116332111633211198533522Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-44176
NC_011149:1077589:1095358109535810988193462Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion protein IcmF4e-44176
NC_011205:1186097:1208040120804012115013462Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-44176
NC_016831:1905289:1905289190528919087503462Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-43174
NC_011740:1991941:2010341201034120138623522Escherichia fergusonii ATCC 35469, complete genomeIcmF-like protein2e-39160
CP002516:3863932:3866111386611138696353525Escherichia coli KO11, complete genometype VI secretion protein IcmF5e-38155
CP002185:234719:2422682422682457923525Escherichia coli W, complete genomeIcmF-like protein5e-38155
NC_016902:3863932:3866111386611138696353525Escherichia coli KO11FL chromosome, complete genometype VI secretion protein IcmF5e-38155
NC_014228:4331327:4338297433829743419023606Xenorhabdus nematophila ATCC 19061, complete genomeConserved hypothetical protein (probable component of SST VI cluster)9e-28122
NC_013892:274297:2849322849322885013570Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein9e-27118
NC_005126:349658:3824313824313859763546Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein6e-26115
NC_005126:349658:3568883568883604333546Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-26115
NC_012962:293976:3021943021943057393546Photorhabdus asymbiotica, complete genomehypothetical protein1e-25114
NC_010465:429095:4346014346014381343534Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein IcmF5e-25113
NC_009708:372422:3779283779283814613534Yersinia pseudotuberculosis IP 31758 chromosome, complete genomelipoprotein5e-25113
NC_006155:4302826:4315540431554043190733534Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein4e-25113
NC_003143:4006884:4012390401239040159233534Yersinia pestis CO92, complete genomehypothetical protein5e-25112
NC_009381:222735:2282322282322317653534Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-25112
NC_014029:3958811:3964317396431739678503534Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-25112
NC_017154:3898925:3904431390443139079643534Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-25112
NC_017168:1631052:1636558163655816400913534Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-25112
NC_017265:4265659:4278317427831742818503534Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-25112
NC_010634:4234932:4246637424663742501703534Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion protein IcmF5e-25112
NC_008570:2014151:2014151201415120176363486Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeImcF family protein7e-24108
NC_015968:4117835:4135929413592941395883660Enterobacter asburiae LF7a chromosome, complete genometype VI secretion protein IcmF1e-23107
NC_013421:1173051:1173051117305111765483498Pectobacterium wasabiae WPP163, complete genometype VI secretion protein IcmF6e-23105
NC_008740:4109000:4125749412574941293333585Marinobacter aquaeolei VT8, complete genometranscriptional regulator, Fis family3e-1683.6