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Query: NC_011149:1077589:1087074 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1087074, End: 1087475, Length: 402

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:3941974:394463339446333945034402Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein1e-63241
NC_011149:4677412:467834246783424678743402Salmonella enterica subsp. enterica serovar Agona str. SL483,ISPsy11, transposase OrfA1e-63241
NC_011149:1987291:198947519894751989876402Salmonella enterica subsp. enterica serovar Agona str. SL483,ISPsy11, transposase OrfA1e-63241
NC_006905:3942753:394983939498393950240402Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein1e-62237
NC_006905:3780000:378839637883963788797402Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein1e-62237
NC_013716:5141269:514867751486775149078402Citrobacter rodentium ICC168, complete genomeIS3 family transposase A7e-56215
NC_015566:2039431:205615420561542056552399Serratia sp. AS12 chromosome, complete genomeISPsy11, transposase OrfA6e-49192
NC_015567:2039443:205616620561662056564399Serratia sp. AS9 chromosome, complete genomeISPsy11, transposase OrfA6e-49192
NC_020829:1840281:186247118624711862872402Pseudomonas denitrificans ATCC 13867, complete genomeISPsy11, transposase OrfA7e-39159
NC_014228:3391500:340598934059893406378390Xenorhabdus nematophila ATCC 19061, complete genometransposase2e-35147
NC_015424:2462522:247543124754312475829399Aeromonas veronii B565 chromosome, complete genomeIS3 family transposase A2e-35147
NC_007492:2310793:231654123165412316942402Pseudomonas fluorescens PfO-1, complete genomeISPsy11, transposase OrfA4e-35146
NC_014931:6415940:642900964290096429419411Variovorax paradoxus EPS chromosome, complete genomeISPsy11, transposase OrfA2e-30130
NC_015224:610807:610807610807611205399Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,IS1669 hypothetical protein2e-30130
NC_011001:2085986:214095421409542141352399Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative transposase2e-25114
NC_013037:2305585:231813523181352318542408Dyadobacter fermentans DSM 18053, complete genometransposase3e-21100
NC_015276:2852010:285267228526722853079408Marinomonas mediterranea MMB-1 chromosome, complete genometransposase8e-2095.5
NC_016599:2119631:212609521260952126520426Owenweeksia hongkongensis DSM 17368 chromosome, complete genomehypothetical protein1e-1581.6
NC_015846:924087:941293941293941922630Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein2e-1374.7