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Query: NC_011147:2676972:2693146 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 2693146, End: 2694264, Length: 1119

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012918:1697860:1709773170977317109061134Geobacter sp. M21 chromosome, complete genomehypothetical protein4e-44179
NC_009720:900884:9008849008849020651182Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-23111
NC_007951:2904644:2910856291085629120101155Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein4e-1995.9
NC_017986:2985514:2992928299292829940701143Pseudomonas putida ND6 chromosome, complete genomehypothetical protein4e-0859.3