Some Help

Query: NC_011147:2676972:2683239 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 2683239, End: 2683427, Length: 189

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:2677964:268770326877032687891189Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-29125
NC_003198:4453457:449922644992264499656431Salmonella enterica subsp. enterica serovar Typhi str. CT18,6e-29125
NC_016857:2871689:288088528808852881073189Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein1e-28125
NC_016810:2871689:288088528808852881073189Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein1e-28125
NC_011149:2802199:281293628129362813124189Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-28125
NC_020260:312805:325818325818326006189Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-28125
NC_011205:2938356:294813729481372948325189Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-28122
NC_010694:614985:634698634698634886189Erwinia tasmaniensis, complete genomeLevan regulatory protein RlsC, similar to hypothetical protein3e-27120
NC_011742:2823000:282350728235072823797291Escherichia coli S88 chromosome, complete genomehypothetical protein1e-25115
NC_012947:2898179:290574129057412905929189Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-25114
NC_011601:846358:862021862021862209189Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein2e-25114
NC_016845:1773416:178144617814461781634189Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein4e-25113
NC_013956:3525711:353679535367953536983189Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-2097.4
NC_013282:3389619:339945533994553399646192Cronobacter turicensis, complete genomehypothetical protein8e-2095.5
NC_014837:3766426:377747437774743777662189Pantoea sp. At-9b chromosome, complete genomehypothetical protein1e-1892
NC_009436:1466580:148363214836321483802171Enterobacter sp. 638, complete genomehypothetical protein3e-0753.9