Pre_GI: BLASTP Hits

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Query: NC_011147:1239904:1258200 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 1258200, End: 1258868, Length: 669

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009925:4044691:404606840460684046862795Acaryochloris marina MBIC11017, complete genomePspA/IM30 family protein4e-22104
NC_015942:63440:669386693867648711Acidithiobacillus ferrivorans SS3 chromosome, complete genomephage shock protein PspA1e-0756.6
NC_011138:3881446:388144638814463882114669Alteromonas macleodii 'Deep ecotype', complete genomephage shock protein A4e-41167
NC_018679:3843870:384640038464003847068669Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completephage shock protein A1e-39163
NC_014551:605855:630602630602631288687Bacillus amyloliquefaciens DSM 7, complete genomephage shock protein A homolog2e-0756.2
NC_017190:591139:616125616125616811687Bacillus amyloliquefaciens LL3 chromosome, complete genomephage shock protein A2e-0756.2
NC_012814:1465738:148595314859531486651699Bifidobacterium animalis subsp. lactis Bl-04, complete genomephage shock protein A-like protein7e-1580.9
NC_012815:1465670:148588514858851486583699Bifidobacterium animalis subsp. lactis DSM 10140, complete genomephage shock protein A-like protein7e-1580.9
NC_010175:3115021:313541131354113136073663Chloroflexus aurantiacus J-10-fl, complete genomePspA/IM30 family protein1e-1067
NC_012032:3110134:313052231305223131184663Chloroflexus sp. Y-400-fl, complete genomephage shock protein A, PspA1e-1067
NC_009792:1345500:134567013456701346338669Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-103374
NC_010001:4486170:451204945120494512726678Clostridium phytofermentans ISDg, complete genomephage shock protein A, PspA3e-1065.1
NC_020291:5808856:581429158142915814944654Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage shock protein A (PspA) family protein9e-0650.4
NC_020181:929000:962362962362963030669Enterobacter aerogenes EA1509E, complete genomePhage shock protein A3e-102370
NC_020063:2480983:248614124861412486809669Enterobacteriaceae bacterium strain FGI 57, complete genomephage shock protein A (PspA) family protein7e-102369
NC_009328:293000:320212320212320865654Geobacillus thermodenitrificans NG80-2 chromosome, complete genomephage shock protein A-like protein4e-1064.7
NC_015954:1222776:122635712263571227139783Halophilic archaeon DL31 chromosome, complete genomephage shock protein PspA8e-1580.5
NC_015387:2042042:205645820564582057126669Marinithermus hydrothermalis DSM 14884 chromosome, complete genomephage shock protein A, PspA2e-1582.4
NC_006511:1243817:126435712643571265025669Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage shock protein A7e-111399
NC_016633:2239413:224672722467272247383657Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomephage shock protein A (IM30), suppresses sigma54-dependent transcription1e-30133
NC_016633:2239413:225150922515092252165657Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomephage shock protein A (IM30), suppresses sigma54-dependent transcription1e-30133
NC_016633:2239413:224888822488882249550663Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomephage shock protein A (IM30), suppresses sigma54-dependent transcription1e-26119
NC_016633:2239413:225272522527252253387663Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomephage shock protein A (IM30), suppresses sigma54-dependent transcription1e-26119