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Query: NC_011147:1239904:1251933 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 1251933, End: 1252346, Length: 414

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:1243817:125809012580901258503414Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-75279
NC_013361:3287671:328913732891373289742606Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein3e-0960.5
NC_013364:1183000:120154012015401202145606Escherichia coli O111:H- str. 11128, complete genomeputative recombination endonuclease3e-0960.5
NC_013361:1558423:157775415777541578359606Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein3e-0960.5
NC_002655:1332961:135028313502831350888606Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by bacteriophage BP-933W3e-0960.5
NC_013364:3312379:333234333323433332948606Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-0960.1
NC_009778:2993218:300862630086263009237612Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-0650.1