Pre_GI: BLASTP Hits

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Query: NC_011094:688626:695659 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 695659, End: 695784, Length: 126

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:5217000:524473352447335244972240Enterobacter aerogenes EA1509E, complete genomeVirulence protein MsgA5e-1373.2
NC_010067:1655815:166869016686901669040351Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-1269.7
NC_009792:3665369:369258336925833692891309Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-1269.7
NC_014121:2745097:275090027509002751139240Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeVirulence protein msgA7e-1269.3
NC_010102:1779707:179252017925201792759240Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1167.8
NC_011083:1323827:133451013345101334749240Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1167.8
NC_004631:1182883:119661711966171196856240Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative virulence protein2e-1167.8
NC_016832:1182496:119558911955891195828240Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1167.8
NC_015566:3622385:362825636282563628498243Serratia sp. AS12 chromosome, complete genomeDinI family protein2e-1167.8
NC_011205:2024458:203727320372732037512240Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-1167.4
NC_011147:1650142:166209916620991662338240Salmonella enterica subsp. enterica serovar Paratyphi A strvirulence protein2e-1167.4
NC_011094:1282385:129612112961211296360240Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1167.4
NC_011149:1870931:188375818837581883997240Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-1167.4
NC_003197:1320861:132946613294661329705240Salmonella typhimurium LT2, complete genomemacrophage survival protein2e-1167.4
NC_006511:1654959:166691616669161667155240Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative virulence protein2e-1167.4
NC_003198:1771432:178427617842761784515240Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative virulence protein2e-1167.4
NC_006905:1342474:136110113611011361340240Salmonella enterica subsp. enterica serovar Choleraesuis strMacrophage survival gene; reduced mouse virulence2e-1167.4
NC_011274:1928939:194174419417441941983240Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91virulence protein MsgA2e-1167.4
NC_011294:1896168:190898319089831909222240Salmonella enterica subsp. enterica serovar Enteritidis strvirulence protein MsgA2e-1167.4
NC_017046:1277787:128639212863921286637246Salmonella enterica subsp. enterica serovar Typhimurium str. 798virulence protein (MsgA)2e-1167.4
NC_016857:1276340:128631912863191286564246Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative virulence protein2e-1167.4
NC_012125:2531817:254462625446262544871246Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence protein2e-1167.4
NC_016863:1277652:128763112876311287870240Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1macrophage survival protein2e-1167.4
NC_016860:1317174:132715313271531327392240Salmonella enterica subsp. enterica serovar Typhimurium strputative virulence protein2e-1167.4
NC_016856:1326503:133944113394411339680240Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Smacrophage survival protein2e-1167.4
NC_016831:1083871:109250010925001092739240Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative virulence protein (MsgA)2e-1167.4
NC_016810:1276340:128631912863191286558240Salmonella enterica subsp. enterica serovar Typhimurium strputative virulence protein (MsgA)2e-1167.4
NC_015761:1181186:120462912046291204868240Salmonella bongori NCTC 12419, complete genomevirulence protein7e-1165.9
NC_010694:2189652:219526521952652195510246Erwinia tasmaniensis, complete genomeVirulence protein MsgA2e-0857.8
NC_014837:2586870:259606325960632596302240Pantoea sp. At-9b chromosome, complete genomeDinI family protein8e-0752.4
NC_014562:1844268:184982918498291850068240Pantoea vagans C9-1 chromosome, complete genomeVirulence protein msgA5e-0649.7