Pre_GI: BLASTP Hits

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Query: NC_011094:593100:616143 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 616143, End: 616322, Length: 180

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013282:1200993:122307712230771223256180Cronobacter turicensis, complete genomehypothetical protein8e-0649.3
NC_010067:2529750:258205925820592582241183Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-25113
NC_006905:368942:390208390208390387180Salmonella enterica subsp. enterica serovar Choleraesuis strNinZ4e-27119
NC_011083:374000:391880391880392059180Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein7e-26115
NC_012125:1330066:135148313514831351662180Salmonella enterica subsp. enterica serovar Paratyphi C strainNinZ4e-27119
NC_016860:364981:385663385663385842180Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-25114