Pre_GI: BLASTP Hits

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Query: NC_011094:593100:605536 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 605536, End: 605919, Length: 384

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:3287671:330006433000643300447384Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-60230
NC_013364:2645438:265569026556902656073384Escherichia coli O111:H- str. 11128, complete genomehypothetical protein7e-60228
NC_013364:1183000:118901111890111189394384Escherichia coli O111:H- str. 11128, complete genomehypothetical protein7e-60228
NC_007946:2625461:263453026345302634913384Escherichia coli UTI89, complete genomebacteriophage HK97 gp409e-57218
NC_009778:2993218:302074730207473021124378Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-47185