Pre_GI: BLASTP Hits

Some Help

Query: NC_011094:593100:599285 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 599285, End: 599593, Length: 309

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:598000:604191604191604502312Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-52204
NC_004631:2366335:237659923765992376910312Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-52204
NC_016832:2363136:237340323734032373711309Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-52204
NC_011274:603901:610086610086610397312Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-52203
NC_011294:585500:591714591714592025312Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-52203
NC_006511:2251022:226202522620252262333309Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-52203
NC_011147:2247460:225720922572092257517309Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-52203
NC_010102:2495441:250554325055432505851309Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-51199
NC_012125:600586:606771606771607082312Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein6e-51199
NC_003197:606048:612233612233612544312Salmonella typhimurium LT2, complete genomehypothetical protein3e-50196
NC_016810:604813:611721611721612032312Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-50196
NC_016856:606742:612927612927613238312Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-50196
NC_016857:604792:611721611721612032312Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Putative diguanylate cyclase/phosphodiesterase domain 03e-50196
NC_016863:606742:612927612927613238312Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-50196
NC_016860:644095:650280650280650588309Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-50196
NC_016831:2402893:241246324124632412684222Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-34143
NC_017046:604789:611718611718611939222Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-34142
NC_011080:610428:616613616613616834222Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein9e-34142