Pre_GI: BLASTP Hits

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Query: NC_011094:593100:596744 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 596744, End: 597262, Length: 519

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:604789:609177609177609695519Salmonella enterica subsp. enterica serovar Typhimurium str. 798fimbrial protein in fimZ 5' region2e-83307
NC_010102:2495441:250787425078742508392519Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-83307
NC_003197:606048:609692609692610210519Salmonella typhimurium LT2, complete genomeputative fimbrial protein2e-83307
NC_016810:604813:609180609180609698519Salmonella enterica subsp. enterica serovar Typhimurium strputative fimbrial protein in fimZ 5' region2e-83307
NC_016856:606742:610386610386610904519Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative fimbrial protein2e-83307
NC_016857:604792:609180609180609698519Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative fimbrial protein2e-83307
NC_016860:644095:647739647739648257519Salmonella enterica subsp. enterica serovar Typhimurium strputative fimbrial protein2e-83307
NC_016863:606742:610386610386610904519Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative fimbrial protein2e-83307
NC_011080:610428:614072614072614590519Salmonella enterica subsp. enterica serovar Newport str. SL254,major fimbrial subunit7e-83305
NC_011149:588895:592539592539593057519Salmonella enterica subsp. enterica serovar Agona str. SL483,major fimbrial subunit7e-83305
NC_006905:651732:655382655382655900519Salmonella enterica subsp. enterica serovar Choleraesuis strputative fimbrial protein7e-83305
NC_006511:2251022:226435622643562264874519Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCfimbria-like protein FimF precursor7e-83305
NC_011083:654479:658123658123658641519Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,major fimbrial subunit7e-83305
NC_011147:2247460:225954022595402260058519Salmonella enterica subsp. enterica serovar Paratyphi A strfimbrial protein7e-83305
NC_011205:609464:613108613108613626519Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853fimbrial protein7e-83305
NC_011274:603901:607545607545608063519Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91fimbrial protein7e-83305
NC_011294:585500:589173589173589691519Salmonella enterica subsp. enterica serovar Enteritidis strfimbrial protein7e-83305
NC_012125:600586:604230604230604748519Salmonella enterica subsp. enterica serovar Paratyphi C strainfimbrial protein7e-83305
NC_016831:2402893:241470724147072415225519Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative fimbrial protein in fimZ 5' region7e-83305
NC_004631:2366335:237893323789332379451519Salmonella enterica subsp. enterica serovar Typhi Ty2, completefimbria-like protein FimF precursor3e-82303
NC_003198:598000:601650601650602168519Salmonella enterica subsp. enterica serovar Typhi str. CT18,fimbria-like protein FimF precursor3e-82303
NC_016832:2363136:237573423757342376252519Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Fimbrial-like protein fimF3e-82303
NC_014618:3482053:350155635015563502074519Enterobacter cloacae SCF1 chromosome, complete genomefimbrial protein domain-containing protein2e-42171
NC_000913:558920:562553562553563068516Escherichia coli K12, complete genomepredicted fimbrial-like adhesin protein4e-40164
NC_010473:498252:501885501885502400516Escherichia coli str. K-12 substr. DH10B, complete genomepredicted fimbrial-like adhesin protein4e-40164
AC_000091:558920:562553562553563068516Escherichia coli W3110 DNA, complete genomepredicted fimbrial-like adhesin protein4e-40164
NC_012759:461680:465313465313465828516Escherichia coli BW2952 chromosome, complete genomeputative fimbrial protein4e-40164
NC_012947:3231893:324944632494463249961516Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein2e-40164
NC_012967:531000:535444535444535959516Escherichia coli B str. REL606 chromosome, complete genomeputative fimbrial protein2e-40164
NC_011415:600375:606847606847607362516Escherichia coli SE11 chromosome, complete genomeputative fimbrial protein9e-39159
NC_011750:527470:531201531201531626426Escherichia coli IAI39 chromosome, complete genomeputative fimbrial protein9e-37152
NC_020211:1621000:164146816414681641995528Serratia marcescens WW4, complete genomefimbrial protein8e-1373.2
NC_010102:2495441:251341225134122513969558Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1168.2
NC_011147:2247460:226507722650772265634558Salmonella enterica subsp. enterica serovar Paratyphi A strtype-1 fimbrial protein, a chain3e-1168.2
NC_006511:2251022:226989322698932270450558Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtype-1 fimbrial protein, a chain precursor3e-1168.2
NC_004431:3986472:399435039943503994907558Escherichia coli CFT073, complete genomePutative minor fimbrial subunit precursor8e-1166.6
NC_008253:3666387:367426436742643674836573Escherichia coli 536, complete genomeputative minor fimbrial subunit precursor7e-1166.6
NC_007946:3811082:382052838205283821085558Escherichia coli UTI89, complete genomeAuf fimbriae minor subunit precursor AufE8e-1166.2
NC_011149:25760:299962999630514519Salmonella enterica subsp. enterica serovar Agona str. SL483,fimbrial subunit1e-1065.9
NC_011080:25751:299872998730505519Salmonella enterica subsp. enterica serovar Newport str. SL254,fimbrial subunit1e-1065.9
NC_010102:25893:300843008430602519Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1065.9
NC_003197:25803:299942999430512519Salmonella typhimurium LT2, complete genomefimbrial subunit1e-1065.9
NC_011205:25805:299962999630514519Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853fimbrial subunit1e-1065.9
NC_011294:25569:297602976030278519Salmonella enterica subsp. enterica serovar Enteritidis strfimbrial subunit1e-1065.9
NC_016810:25803:299942999430512519Salmonella enterica subsp. enterica serovar Typhimurium strfimbrial subunit1e-1065.9
NC_016831:25760:299962999630514519Salmonella enterica subsp. enterica serovar Gallinarum/pullorumfimbrial subunit1e-1065.9
NC_011274:25692:298832988330401519Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91fimbrial subunit1e-1065.9
NC_017046:25758:299942999430512519Salmonella enterica subsp. enterica serovar Typhimurium str. 798fimbrial subunit1e-1065.9
NC_016863:25804:299952999530513519Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1fimbrial subunit1e-1065.9
NC_016860:25758:299942999430512519Salmonella enterica subsp. enterica serovar Typhimurium strfimbrial subunit1e-1065.9
NC_016857:25803:299942999430512519Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74fimbrial subunit1e-1065.9
NC_016856:25803:299942999430512519Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sfimbrial subunit1e-1065.9
NC_009648:293052:311624311624312142519Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomefimbrial subunit2e-1065.5
NC_011745:3992434:400031340003134000891579Escherichia coli ED1a chromosome, complete genomeputative minor fimbrial subunit AufE2e-1065.5
NC_003198:25807:299982999830516519Salmonella enterica subsp. enterica serovar Typhi str. CT18,fimbrial subunit3e-1064.7
NC_004631:25807:299982999830516519Salmonella enterica subsp. enterica serovar Typhi Ty2, completefimbrial subunit3e-1064.7
NC_016832:25807:299982999830516519Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Fimbrial subunit3e-1064.7
NC_009792:4017510:403709640370964037623528Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-1064.3
NC_006511:25796:299872998730505519Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC5e-1063.9
NC_010067:2881448:289695228969522897470519Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-1063.2
NC_004631:2366335:238447023844702385024555Salmonella enterica subsp. enterica serovar Typhi Ty2, completeType-1 fimbrial protein, a chain precursor1e-0962.4
NC_011740:3453455:346445234644523465024573Escherichia fergusonii ATCC 35469, complete genomeputative fimbrial minor structural subunit2e-0962
NC_011094:25762:299982999830516519Salmonella enterica subsp. enterica serovar Schwarzengrund strfimbrial protein2e-0961.6
NC_021066:4906239:490573049057304906248519Raoultella ornithinolytica B6, complete genomeP pilus assembly protein, pilin FimA3e-0961.2
NC_016514:2079975:208980720898072090496690Enterobacter cloacae EcWSU1 chromosome, complete genometype-1 fimbrial protein subunit6e-0960.1
CP002797:1591000:160314216031421603606465Escherichia coli NA114, complete genometype 1 fimbrial protein1e-0859.7
CU928160:1579375:159958615995861600197612Escherichia coli IAI1 chromosome, complete genomeputative major fimbrial subunit FmlA1e-0859.3
NC_011741:1579375:159958615995861600197612Escherichia coli IAI1 chromosome, complete genomeputative major fimbrial subunit FmlA1e-0859.3
CP002185:1681327:170153817015381702101564Escherichia coli W, complete genomeputative fimbrial protein1e-0859.3
CP002516:2395578:240374724037472404310564Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein1e-0859.3
NC_007946:1632025:165034616503461650957612Escherichia coli UTI89, complete genomeputative Fml fimbriae subunit1e-0859.3
NC_011742:1574036:158927315892731589884612Escherichia coli S88 chromosome, complete genomemajor fimbrial subunit FmlA1e-0859.3
NC_016902:2395578:240374724037472404310564Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein1e-0859.3
NC_011742:4873351:488593248859324886486555Escherichia coli S88 chromosome, complete genomemajor type 1 subunit fimbrin (pilin)1e-0859.3
NC_011751:1770376:179058817905881791199612Escherichia coli UMN026 chromosome, complete genomeputative major fimbrial subunit FmlA1e-0858.9
NC_002655:1966464:197404619740461974609564Escherichia coli O157:H7 EDL933, complete genomeputative major fimbrial subunit2e-0858.9
NC_011751:3984236:399241539924153992987573Escherichia coli UMN026 chromosome, complete genomeputative fimbrial minor structural subunit2e-0858.5
NC_015663:549425:573487573487574068582Enterobacter aerogenes KCTC 2190 chromosome, complete genomemajor subunit of type 1 fimbria3e-0858.2
NC_004431:5123325:513778951377895138394606Escherichia coli CFT073, complete genomeType-1 fimbrial protein, A chain precursor4e-0857.4
NC_011740:3453455:346392034639203464444525Escherichia fergusonii ATCC 35469, complete genomeputative exported fimbrial-like adhesin protein4e-0857.4
NC_011751:3984236:399188339918833992407525Escherichia coli UMN026 chromosome, complete genomeputative exported fimbrial-like adhesin protein5e-0857.4
NC_008253:4817864:484835348483534848901549Escherichia coli 536, complete genometype-1 fimbrial major subunit6e-0857
NC_011745:5114500:512939151293915129939549Escherichia coli ED1a chromosome, complete genomemajor type 1 subunit fimbrin6e-0857
NC_004431:1166568:118821311882131188755543Escherichia coli CFT073, complete genomeF1C major fimbrial subunit precursor6e-0857
NC_008253:296500:311279311279311824546Escherichia coli 536, complete genomeS-fimbrial protein subunit precursor5e-0857
NC_013850:2685835:270272227027222703252531Klebsiella variicola At-22 chromosome, complete genomeFimbrial protein5e-0857
NC_011283:2684046:269792626979262698456531Klebsiella pneumoniae 342 chromosome, complete genomefimbrial protein5e-0857
NC_002695:5381576:539800653980065398554549Escherichia coli O157:H7 str. Sakai, complete genomeFimA8e-0856.6
NC_009778:1902995:191378919137891914319531Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0756.2
NC_011353:5455224:547165454716545472202549Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype-1 fimbrial protein-like protein1e-0755.8
NC_013008:5411285:542771554277155428263549Escherichia coli O157:H7 str. TW14359 chromosome, complete genomemajor type 1 subunit fimbrin1e-0755.8
NC_013941:5219841:523628752362875236835549Escherichia coli O55:H7 str. CB9615 chromosome, complete genomemajor type 1 subunit fimbrin1e-0755.8
NC_012731:560199:588698588698589210513Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomefimbrial protein2e-0755.1
NC_009348:4011160:402230940223094022860552Aeromonas salmonicida subsp. salmonicida A449, complete genometype I pilus assembly protein FimF4e-0754.3
NC_013850:2685835:269785926978592698371513Klebsiella variicola At-22 chromosome, complete genomeFimbrial protein8e-0753.1
NC_008570:546736:558215558215558766552Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomefimbrial protein1e-0652.8
NC_010694:715500:724774724774725322549Erwinia tasmaniensis, complete genomefimbrial protein2e-0652.4
NC_011745:3992434:400083640008364001432597Escherichia coli ED1a chromosome, complete genomeputative minor fimbrial subunit AufD2e-0652.4
NC_008563:3843859:385383538538353854407573Escherichia coli APEC O1, complete genomeAuf fimbriae minor subunit precursor AufD1e-0652.4
NC_011742:3758618:376858637685863769158573Escherichia coli S88 chromosome, complete genomeminor fimbrial subunit AufD1e-0652.4
NC_008253:3666387:367478736747873675350564Escherichia coli 536, complete genomeputative minor fimbrial subunit precursor1e-0652.4
NC_020064:3790472:380745038074503807983534Serratia marcescens FGI94, complete genomeP pilus assembly protein, pilin FimA2e-0652
NC_011283:2684046:269306326930632693569507Klebsiella pneumoniae 342 chromosome, complete genomefimbrial protein2e-0652
NC_015567:1206727:122081612208161221349534Serratia sp. AS9 chromosome, complete genomeFimbrial protein domain-containing protein4e-0650.8
NC_015566:1206500:122063112206311221164534Serratia sp. AS12 chromosome, complete genomeFimbrial protein domain-containing protein4e-0650.8
NC_013716:1918664:193678419367841937314531Citrobacter rodentium ICC168, complete genomeputative major fimbrial subunit4e-0650.8
NC_011601:3951324:396399439639943964518525Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomefimbrial major protein5e-0650.8
NC_015424:525039:536185536185536712528Aeromonas veronii B565 chromosome, complete genomeFimbrial protein9e-0649.7