Pre_GI: BLASTP Hits

Some Help

Query: NC_011094:4442478:4450333 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 4450333, End: 4450515, Length: 183

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013508:343617:3582713582713602381968Edwardsiella tarda EIB202, complete genomeputative type I secretion protein4e-0650.1
NC_015761:4188250:4202401420240142043801980Salmonella bongori NCTC 12419, complete genomeABC transporter ATP-binding protein3e-1270.5
NC_010067:3204682:3221562322156232235321971Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0961.2
NC_011149:4474012:448186544818654482047183Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein8e-2095.9
NC_016831:4367000:437529343752934375475183Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-1685.1
NC_011083:4547825:455564645556464555828183Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein8e-2095.9
NC_011080:4543000:455085745508574551039183Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-1993.6
NC_010102:4477836:448575244857524486126375Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-1786.7