Pre_GI: BLASTP Hits

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Query: NC_011094:3778000:3809083 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 3809083, End: 3809916, Length: 834

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009778:4014026:403909040390904039812723Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-141500
NC_007498:2638671:2646511264651126480041494Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein7e-0961.2
NC_009802:197482:2275452275452287741230Campylobacter concisus 13826, complete genome5e-0858.5
NC_017986:409899:4241994241994252841086Pseudomonas putida ND6 chromosome, complete genomehypothetical protein6e-0858.2
NC_009348:3819271:382645538264553827051597Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein4e-0755.5
NC_008740:1484531:1494862149486214960791218Marinobacter aquaeolei VT8, complete genomehypothetical protein5e-0755.1
NC_010625:229478:245003245003245821819Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein1e-0653.9
NC_012724:1781554:179266417926641793482819Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein1e-0653.9