Pre_GI: BLASTP Hits

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Query: NC_011094:2791719:2800940 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 2800940, End: 2804758, Length: 3819

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010424:825117:8297558297558334383684Candidatus Desulforudis audaxviator MP104C, complete genomehypothetical protein3e-90334
NC_011145:3750021:3768611376861137723123702Anaeromyxobacter sp. K, complete genomehypothetical protein2e-77291
NC_009051:1118486:1126688112668811305213834Methanoculleus marisnigri JR1, complete genomeSEC-C motif domain protein7e-22107
NC_007681:542494:5424945424945462433750Methanosphaera stadtmanae DSM 3091, complete genomeconserved hypothetical membrane-spanning protein1e-1689.7